Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 RPL21P1-201ENST00000399532 476 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC004386.2-201ENST00000441858 148 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC016717.1-201ENST00000448918 286 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC087343.1-201ENST00000477341 475 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 HMGN1P7-201ENST00000491722 313 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 RNU6-759P-201ENST00000516740 103 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 RNU6-323P-201ENST00000521915 107 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AL391840.1-201ENST00000571144 367 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AL391646.1-201ENST00000603860 190 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 SNORD114-21-201ENST00000606412 72 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC021506.2-201ENST00000612354 169 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 AC068647.2-201ENST00000637380 353 ntBASIC0.79□□□□□ -2.28
RBFOX3A6NFN3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 MIR586-201ENST00000385035 97 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 MIR549A-201ENST00000385268 96 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 BX295541.1-201ENST00000417774 250 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 CETN4P-201ENST00000432407 469 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 MTND4P32-201ENST00000437189 1237 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AC074290.1-201ENST00000448883 135 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 RPS27P1-201ENST00000450552 247 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 RNU6-1037P-201ENST00000459571 107 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AP001372.4-201ENST00000524889 472 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 TPRKBP2-201ENST00000565969 475 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 MIR5583-1-201ENST00000580941 59 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AC025449.1-201ENST00000603896 529 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 AL050303.3-201ENST00000613704 284 ntBASIC0.78□□□□□ -2.28
RBFOX3A6NFN3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.78□□□□□ -2.29
RBFOX3A6NFN3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RNU6-392P-201ENST00000364926 101 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RNU6-417P-201ENST00000384712 107 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 MIR19B1-201ENST00000384829 87 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RNA5SP109-201ENST00000391010 116 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RNU2-9P-201ENST00000410194 145 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AC007215.1-201ENST00000464893 276 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RPL39P28-201ENST00000465655 155 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AC010493.1-201ENST00000513479 292 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 HIF1AP1-201ENST00000553642 175 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AL929325.1-201ENST00000603096 117 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 Z99497.2-201ENST00000603634 310 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AL360219.1-201ENST00000610230 366 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 AC006001.4-201ENST00000622243 395 ntBASIC0.77□□□□□ -2.29
RBFOX3A6NFN3 MTND4P5-201ENST00000435821 1374 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1120P-201ENST00000362988 108 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 SNORD73A-201ENST00000386062 65 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC004866.1-201ENST00000411748 78 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 POLR2J4-204ENST00000418424 324 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC013410.2-201ENST00000422627 201 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RAB28P5-201ENST00000427490 651 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RNU7-180P-201ENST00000459240 63 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 RPL39P5-202ENST00000512505 151 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 SUMO2P16-201ENST00000519475 264 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 SUB1P2-201ENST00000556401 297 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 MIR3915-201ENST00000578518 97 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 MIR4661-201ENST00000582720 75 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AL390123.1-201ENST00000603216 237 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AL020996.3-201ENST00000606617 222 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 AC008873.1-201ENST00000625051 138 ntBASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.76□□□□□ -2.29
RBFOX3A6NFN3 SNORA25.9-201ENST00000365087 128 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 RNA5SP323-201ENST00000391094 133 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 MIR1253-201ENST00000408273 105 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 RNA5SP494-201ENST00000410653 129 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 SNRPEP10-201ENST00000420249 274 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AL365203.2-201ENST00000423444 196 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 MTCO2P11-201ENST00000431069 680 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 MTCO3P8-201ENST00000453691 755 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 COX6CP14-201ENST00000469580 174 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC025465.4-201ENST00000513422 638 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1069P-201ENST00000516612 133 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 MTATP6P3-201ENST00000581686 676 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AP000907.4-201ENST00000604143 237 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms