Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MIR8076-201ENST00000611401 83 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 RMST_6.1-201ENST00000611980 203 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL136221.1-201ENST00000621449 509 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 AC100810.6-201ENST00000638068 285 ntBASIC1.58□□□□□ -2.16
SMIM28A0A1B0GU29 ZNF209P-201ENST00000593450 2304 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 SNORD50.1-201ENST00000362987 71 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 SNORA18.2-201ENST00000383865 132 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-877P-201ENST00000383868 107 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 SNORA32.2-201ENST00000384049 122 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-968P-201ENST00000384076 107 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-831P-201ENST00000384548 107 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP501-201ENST00000410990 112 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 AC004866.1-201ENST00000411748 78 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 MTND1P4-201ENST00000435196 415 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 SNRPEP8-201ENST00000442866 260 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-273P-201ENST00000516937 96 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 AC012493.3-201ENST00000604494 112 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 AC073869.6-201ENST00000640656 341 ntBASIC1.57□□□□□ -2.16
SMIM28A0A1B0GU29 LINC02555-201ENST00000563933 1951 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP493-201ENST00000364115 91 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 Y_RNA.453-201ENST00000384223 109 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-784P-201ENST00000384330 106 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-306P-201ENST00000384617 107 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU11-3P-201ENST00000391111 133 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-1093P-201ENST00000391194 107 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC245102.2-201ENST00000448956 180 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC132942.1-201ENST00000486753 483 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC069439.1-201ENST00000494739 167 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 TRBVA-201ENST00000498804 316 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 HMGB3P17-201ENST00000504195 649 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU2-44P-201ENST00000516795 194 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-1088P-201ENST00000516850 104 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AP005639.2-201ENST00000527592 928 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC016256.1-201ENST00000547971 354 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AL161670.1-201ENST00000554348 137 ntBASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.56□□□□□ -2.16
SMIM28A0A1B0GU29 Y_RNA.6-201ENST00000362350 114 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-562P-201ENST00000362731 107 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-23P-201ENST00000363283 107 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-933P-201ENST00000384424 107 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-160P-201ENST00000384591 107 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 MIR517A-201ENST00000385001 87 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP494-201ENST00000410653 129 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-373P-201ENST00000411247 98 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RPS26P42-201ENST00000413485 326 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 ZNF885P-201ENST00000420174 1098 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC009474.2-201ENST00000451383 136 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC016925.1-201ENST00000458303 298 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC130509.1-201ENST00000464158 433 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU6-864P-201ENST00000516256 108 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 RNU5F-4P-201ENST00000516581 114 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 MIR4421-201ENST00000578133 69 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 FGF7P1-201ENST00000582820 288 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
SMIM28A0A1B0GU29 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 MIR320A-201ENST00000385302 82 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 RNA5SP212-201ENST00000391223 107 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC123900.1-201ENST00000420390 96 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC139712.2-201ENST00000424302 339 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 Z82188.1-201ENST00000436709 154 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 RNU7-14P-201ENST00000459331 62 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC010531.2-201ENST00000465012 153 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC114801.2-201ENST00000503825 781 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 RNVU1-2-201ENST00000516326 135 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.54□□□□□ -2.16
SMIM28A0A1B0GU29 MIR3122-201ENST00000577243 73 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 162.7 ms