Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 PCMTD1P1-201ENST00000455560 355 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-566P-201ENST00000516790 107 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP454-201ENST00000517231 127 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 RNU2-19P-201ENST00000517288 84 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC090517.1-201ENST00000569307 266 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC060780.3-201ENST00000589464 80 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AP003465.2-201ENST00000602571 373 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC009994.1-201ENST00000606889 253 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AL449363.1-201ENST00000617815 186 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 AC091932.3-201ENST00000624223 323 ntBASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
TRAV40A0A0B4J280 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC009487.4-201ENST00000624969 3585 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 CASC19-280ENST00000642102 1351 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.4-201ENST00000362333 112 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-545P-201ENST00000362681 104 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.157-201ENST00000363638 102 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-1283P-201ENST00000365314 105 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-1286P-201ENST00000383871 107 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-128P-201ENST00000383976 107 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-26P-201ENST00000383985 107 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-968P-201ENST00000384076 107 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-611P-201ENST00000384276 104 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.573-201ENST00000384763 105 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 MIR517C-201ENST00000385103 95 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-174P-201ENST00000410406 106 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU4-14P-201ENST00000410858 122 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-1304P-201ENST00000411374 106 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 MTND1P2-201ENST00000430604 821 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 MTND1P17-201ENST00000448961 204 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNU7-95P-201ENST00000459222 64 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 U8.21-201ENST00000459536 136 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 MTND4P17-201ENST00000470444 350 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RPL23AP75-201ENST00000491601 451 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 HMGB3P17-201ENST00000504195 649 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP137-201ENST00000516833 135 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 EIF4A1P12-201ENST00000551910 141 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 CYP4A27P-201ENST00000567218 190 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AL356157.2-201ENST00000605122 111 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC019193.3-201ENST00000609144 554 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 MIR6128-201ENST00000615528 109 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AL590240.4-201ENST00000616908 390 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 AC022513.1-201ENST00000624512 117 ntBASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
TRAV40A0A0B4J280 ZNF702P-202ENST00000434269 1966 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.164-201ENST00000363709 102 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 U3.9-201ENST00000363823 204 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-784P-201ENST00000384330 106 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 Y_RNA.533-201ENST00000384596 114 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RNU6-1106P-201ENST00000390845 107 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 MIR548F5-201ENST00000408421 86 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP494-201ENST00000410653 129 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AP1B1P2-201ENST00000416196 106 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 PDCL2P1-201ENST00000419302 352 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 CBX3P6-201ENST00000430257 527 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RBMX2P4-201ENST00000441256 376 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC087477.1-201ENST00000465747 340 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RPL30P10-201ENST00000488148 337 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 MTND5P5-201ENST00000503764 376 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 RNA5SP490-201ENST00000517141 136 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 SNRPGP17-201ENST00000603780 214 ntBASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TRAV40A0A0B4J280 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 SNORD14D-201ENST00000384390 87 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 MIR17-201ENST00000385012 84 ntBASIC1.24□□□□□ -2.21
TRAV40A0A0B4J280 MT-TL1-201ENST00000386347 75 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms