Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-498P-201ENST00000459468 107 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 SNORA31.10-201ENST00000516482 106 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU2-34P-201ENST00000516534 121 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-1069P-201ENST00000516612 133 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC106038.2-201ENST00000520706 568 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 MIR5695-201ENST00000579717 85 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 MIR3682-201ENST00000581338 84 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC090616.2-202ENST00000584248 222 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AP001596.2-201ENST00000608410 312 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC016597.2-201ENST00000613256 341 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 AC005562.2-201ENST00000618264 111 ntBASIC0.61□□□□□ -2.31
TRAV41A0A0B4J266 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 SNORA72.2-201ENST00000365028 127 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-975P-201ENST00000384296 105 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-417P-201ENST00000384712 107 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RNA5SP467-201ENST00000391274 118 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 CYCSP46-201ENST00000423569 204 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC010099.3-201ENST00000423896 409 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 CETN4P-201ENST00000432407 469 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RPS29P27-201ENST00000463711 170 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RPS29P1-201ENST00000465274 159 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 RNU6-759P-201ENST00000516740 103 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 MIR4753-201ENST00000585119 83 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 BNIP3P39-201ENST00000601077 554 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 Z99497.2-201ENST00000603634 310 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC106800.4-201ENST00000614905 153 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AP001506.1-201ENST00000615444 211 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC006001.4-201ENST00000622243 395 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 U6.108-201ENST00000637764 58 ntBASIC0.6□□□□□ -2.31
TRAV41A0A0B4J266 AC009541.1-201ENST00000438279 2662 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 Y_RNA.224-201ENST00000364308 111 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC006461.1-201ENST00000412637 326 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC004386.2-201ENST00000441858 148 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 SNRPFP3-201ENST00000457792 225 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 RNU7-125P-201ENST00000458760 62 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 RNU7-167P-201ENST00000459160 62 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 RPL39P38-201ENST00000467018 153 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC092991.1-201ENST00000477176 376 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 TRBVA-201ENST00000498804 316 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC105417.1-201ENST00000514691 285 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 ACA64.5-201ENST00000516207 127 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 RN7SKP49-201ENST00000516675 260 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 SNORA18.6-201ENST00000516792 115 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC009094.1-201ENST00000564443 426 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 MIR5006-201ENST00000583027 110 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AL390123.1-201ENST00000603216 237 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC011458.1-201ENST00000604034 617 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC022217.4-201ENST00000604389 163 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 uc_338.11-201ENST00000619132 160 ntBASIC0.59□□□□□ -2.31
TRAV41A0A0B4J266 AC018630.2-201ENST00000534866 2403 ntBASIC0.59□□□□□ -2.32
TRAV41A0A0B4J266 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.59□□□□□ -2.32
TRAV41A0A0B4J266 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU5B-2P-201ENST00000363036 113 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-181P-201ENST00000363225 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-553P-201ENST00000364047 96 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 Y_RNA.238-201ENST00000364441 102 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-456P-201ENST00000384493 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-1031P-201ENST00000384773 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AL031577.2-201ENST00000404133 280 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU2-9P-201ENST00000410194 145 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-248P-201ENST00000410720 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 BX295541.1-201ENST00000417774 250 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RAB28P5-201ENST00000427490 651 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 MTCO2P3-201ENST00000442543 421 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 MTCO3P8-201ENST00000453691 755 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AL033528.1-201ENST00000453780 140 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-948P-201ENST00000516374 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-612P-201ENST00000516909 102 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 RNU6-445P-201ENST00000516949 107 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 SNORA70.22-201ENST00000517160 124 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AC069113.1-201ENST00000517763 267 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 TCL6_2.1-201ENST00000615162 119 ntBASIC0.58□□□□□ -2.32
TRAV41A0A0B4J266 MIR6835-201ENST00000621552 64 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms