Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 RNU7-21P-201ENST00000459430 62 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AK3P2-201ENST00000507976 429 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 LRRC34P2-201ENST00000514850 553 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-1178P-201ENST00000516674 107 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC103996.1-201ENST00000555468 102 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC091805.2-201ENST00000603848 235 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC242498.1-201ENST00000604134 111 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC022217.4-201ENST00000604389 163 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AC243994.1-201ENST00000618627 109 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AL031667.3-201ENST00000620124 655 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 MIR8054-201ENST00000620877 86 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 AL513423.1-201ENST00000621695 132 ntBASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.36□□□□□ -2.35
TMEM56-RWDD3S4R434 RNA5SP499-201ENST00000363982 119 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 RNU6-636P-201ENST00000384598 107 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AL355796.1-201ENST00000406706 323 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AL031274.1-201ENST00000450334 232 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AC098869.1-201ENST00000481627 292 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AC007834.2-201ENST00000536310 343 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AL391840.1-201ENST00000571144 367 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 Z83818.1-201ENST00000603584 150 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AP001836.1-201ENST00000604675 523 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AC012557.2-201ENST00000605919 418 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 AL359697.1-201ENST00000624879 587 ntBASIC0.35□□□□□ -2.35
TMEM56-RWDD3S4R434 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORD114-22-201ENST00000365423 72 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR660-201ENST00000385235 97 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR653-201ENST00000385279 96 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-550P-201ENST00000391057 101 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR1276-201ENST00000408707 83 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 Y_RNA.608-201ENST00000410647 95 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 FABP5P4-201ENST00000437203 171 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU7-90P-201ENST00000459216 62 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RPS29P1-201ENST00000465274 159 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC079382.1-201ENST00000493346 557 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU1-142P-201ENST00000516682 145 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-1220P-201ENST00000517126 108 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC022616.3-201ENST00000523940 148 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR4781-201ENST00000585250 76 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC146944.4-201ENST00000602697 718 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC005562.2-201ENST00000618264 111 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 U6.108-201ENST00000637764 58 ntBASIC0.34□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-1335P-201ENST00000365426 107 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-827P-201ENST00000365553 106 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA12.1-201ENST00000390873 148 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-440P-201ENST00000390882 105 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 AC092628.1-201ENST00000436250 252 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 EXOSC3P1-201ENST00000448649 500 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 AC113410.1-201ENST00000505029 247 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR4778-201ENST00000577635 80 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 MTATP6P3-201ENST00000581686 676 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 AC097065.2-201ENST00000608159 533 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR6504-201ENST00000613520 61 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 AC004808.1-201ENST00000627671 721 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR5087-201ENST00000635826 76 ntBASIC0.33□□□□□ -2.36
TMEM56-RWDD3S4R434 CASC19-280ENST00000642102 1351 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 ELL2P3-201ENST00000457883 1602 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 Y_RNA.191-201ENST00000363972 113 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 RNY1P12-201ENST00000364251 105 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORD116-13-201ENST00000384408 92 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA75.2-201ENST00000391138 150 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 SNORA75.3-201ENST00000391231 150 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AL034345.1-201ENST00000407768 123 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AL356583.2-201ENST00000426536 280 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC245047.3-201ENST00000429428 127 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC004386.2-201ENST00000441858 148 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 NFU1P2-201ENST00000448700 469 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 RPL39P39-201ENST00000455840 151 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC025465.4-201ENST00000513422 638 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 SCARNA24.1-201ENST00000516465 137 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-229P-201ENST00000516614 102 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC090049.2-201ENST00000550377 109 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 MIR5006-201ENST00000583027 110 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC073349.3-201ENST00000617616 186 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 AC138649.3-201ENST00000622154 254 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 U6.114-201ENST00000636407 96 ntBASIC0.32□□□□□ -2.36
TMEM56-RWDD3S4R434 RNU6-1287P-201ENST00000362914 107 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms