Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 RNY3P4-201ENST00000384428 101 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 MIR10B-201ENST00000385011 110 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 MIR27B-201ENST00000385129 97 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 MIR208B-201ENST00000401172 77 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 MIR1252-201ENST00000408861 65 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 RPL30P4-201ENST00000429309 333 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 RPL21P2-201ENST00000440049 481 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 AC096638.1-201ENST00000444678 216 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 MTCO3P8-201ENST00000453691 755 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 AC007536.1-201ENST00000533382 349 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 BX322639.1-202ENST00000423987 2213 ntBASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.94□□□□□ -1.94
PCDHA1Q9Y5I3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 RNU1-72P-201ENST00000362976 153 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-281P-201ENST00000384212 103 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 MIR487A-201ENST00000385009 80 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 SNORA26.7-201ENST00000391288 122 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AL358176.2-201ENST00000425769 204 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AL513328.1-201ENST00000446460 224 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AC080013.2-201ENST00000460866 323 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AC145146.1-201ENST00000496370 254 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 RNA5SP320-201ENST00000516263 124 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 MIR4435-1-201ENST00000582552 80 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 RPS29P30-201ENST00000600975 111 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AL355297.3-201ENST00000604082 446 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 AL078596.1-201ENST00000624856 447 ntBASIC2.93□□□□□ -1.94
PCDHA1Q9Y5I3 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 snoU2_19.1-201ENST00000362361 80 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 U3.9-201ENST00000363823 204 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-280P-201ENST00000364145 104 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 RNU4-50P-201ENST00000364361 141 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 MIR29B2-201ENST00000385055 81 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 WARS2P1-201ENST00000429678 537 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 U8.20-201ENST00000459445 131 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC073901.1-201ENST00000462471 408 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-1046P-201ENST00000516538 107 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 Y_RNA.715-201ENST00000517082 110 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AL117187.1-201ENST00000555482 181 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AL021879.1-201ENST00000611756 288 ntBASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHA1Q9Y5I3 AC080128.1-201ENST00000474389 1917 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 Y_RNA.153-201ENST00000363615 91 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RNU6-245P-201ENST00000384020 107 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 MIR548F4-201ENST00000408515 105 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 HMGB3P2-201ENST00000411913 584 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RN7SL429P-201ENST00000479090 223 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RN7SL489P-201ENST00000486185 223 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RN7SL327P-201ENST00000488659 223 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AC022868.1-201ENST00000517767 391 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AL670379.2-201ENST00000604983 252 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AC069294.1-201ENST00000608397 350 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AC005296.1-201ENST00000616145 209 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RN7SL853P-201ENST00000617250 223 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 U4.3-201ENST00000621047 82 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 AC138915.1-201ENST00000565427 1685 ntBASIC2.91□□□□□ -1.94
PCDHA1Q9Y5I3 RNU1-76P-201ENST00000362903 159 ntBASIC2.9□□□□□ -1.95
PCDHA1Q9Y5I3 Y_RNA.133-201ENST00000363428 110 ntBASIC2.9□□□□□ -1.95
PCDHA1Q9Y5I3 RNU6-450P-201ENST00000364654 107 ntBASIC2.9□□□□□ -1.95
PCDHA1Q9Y5I3 SNORA51.11-201ENST00000384442 131 ntBASIC2.9□□□□□ -1.95
PCDHA1Q9Y5I3 RNU6-1105P-201ENST00000384774 107 ntBASIC2.9□□□□□ -1.95
PCDHA1Q9Y5I3 SNORA46.1-201ENST00000391069 153 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms