Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 AC025754.2-201ENST00000606491 432 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 MIR3658-201ENST00000636291 56 ntBASIC4.17□□□□□ -1.74
NOD1Q9Y239 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.17□□□□□ -1.74
NOD1Q9Y239 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NOD1Q9Y239 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.16□□□□□ -1.74
NOD1Q9Y239 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.16□□□□□ -1.74
NOD1Q9Y239 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
NOD1Q9Y239 Y_RNA.81-201ENST00000362997 102 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 RNA5SP50-201ENST00000363731 107 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 MIR586-201ENST00000385035 97 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 Z98742.2-201ENST00000431564 187 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 AL031183.1-201ENST00000457667 207 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 RPS26P28-201ENST00000470806 348 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
NOD1Q9Y239 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 AC012531.5-201ENST00000611375 151 ntBASIC4.16□□□□□ -1.74
NOD1Q9Y239 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NOD1Q9Y239 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.15□□□□□ -1.74
NOD1Q9Y239 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
NOD1Q9Y239 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NOD1Q9Y239 AC097463.2-201ENST00000421074 142 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 HLA-N-201ENST00000437516 135 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 AC008267.6-201ENST00000441664 139 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 AL391903.3-201ENST00000612158 163 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NOD1Q9Y239 MAPK10-372ENST00000641954 3413 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 AL136164.4-201ENST00000625013 2135 ntBASIC4.15□□□□□ -1.75
NOD1Q9Y239 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.15□□□□□ -1.75
NOD1Q9Y239 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 RNU6-199P-201ENST00000362954 107 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 SNORD32B-201ENST00000364460 84 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 Y_RNA.337-201ENST00000365312 102 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 MIR1185-2-201ENST00000408687 86 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 RNA5SP146-201ENST00000410743 123 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 EIF4EP4-201ENST00000424916 578 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 AC074290.1-201ENST00000448883 135 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 AL121914.1-201ENST00000450188 156 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 SNORA31.1-201ENST00000515993 133 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 SNORA31.5-201ENST00000516190 133 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 RNU5F-4P-201ENST00000516581 114 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 RNU6-1098P-201ENST00000516772 96 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 AC069240.1-201ENST00000548774 375 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 MIR5688-201ENST00000580619 83 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 AC008739.2-201ENST00000597006 317 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 AC007256.1-201ENST00000392253 2765 ntBASIC4.14□□□□□ -1.75
NOD1Q9Y239 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NOD1Q9Y239 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NOD1Q9Y239 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NOD1Q9Y239 MFSD8-236ENST00000641509 4050 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NOD1Q9Y239 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 SNORA51.4-201ENST00000364993 124 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 AP002088.1-201ENST00000382740 395 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 MIR3074-201ENST00000384885 81 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 MT-TT-201ENST00000387460 66 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 MIR767-201ENST00000390228 109 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 RNU6-1077P-201ENST00000410506 102 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 AC006461.1-201ENST00000412637 326 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 HSPE1P21-201ENST00000438283 308 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 VWA8P1-201ENST00000510889 176 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 MIR4724-201ENST00000579485 89 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 RPL30P11-203ENST00000598995 310 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 AP001486.2-201ENST00000561652 5113 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 CEP170P1-201ENST00000502249 4587 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 AL353746.1-201ENST00000566293 6881 ntBASIC4.13□□□□□ -1.75
NOD1Q9Y239 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.13□□□□□ -1.75
NOD1Q9Y239 AC011266.1-201ENST00000624119 3569 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.12□□□□□ -1.75
NOD1Q9Y239 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NOD1Q9Y239 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.12□□□□□ -1.75
NOD1Q9Y239 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NOD1Q9Y239 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.12□□□□□ -1.75
NOD1Q9Y239 RNU6-144P-201ENST00000383951 107 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 SNORA20-201ENST00000384662 132 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 MTND4LP9-201ENST00000427694 174 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.12□□□□□ -1.75
NOD1Q9Y239 RPS4XP2-201ENST00000458402 793 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 HMGN2P9-201ENST00000476875 229 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 AC006445.1-201ENST00000491925 405 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 AC025554.1-201ENST00000505641 188 ntBASIC4.12□□□□□ -1.75
NOD1Q9Y239 SCARNA13-201ENST00000516672 275 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 242.7 ms