Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-529P-201ENST00000363383 104 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-1104P-201ENST00000384723 104 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.620-201ENST00000411009 88 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 CYP4A43P-201ENST00000568156 121 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 MIR4694-201ENST00000578534 80 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 ZYXP1-201ENST00000617638 118 ntBASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.36□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-249P-201ENST00000363016 102 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-335P-201ENST00000364563 113 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.565-201ENST00000384719 101 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 HSPE1P12-201ENST00000412576 301 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 SNRPGP10-201ENST00000432323 225 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 VDAC1P3-201ENST00000434069 851 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 HSPE1P18-201ENST00000517602 280 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 AC027419.1-201ENST00000522976 328 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 MIR5197-201ENST00000583721 112 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 RPL17P51-201ENST00000605218 238 ntBASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TRIM35Q9UPQ4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 RNU6-349P-201ENST00000362402 107 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 SNORD38C-201ENST00000384381 69 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 Y_RNA.531-201ENST00000384589 121 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 U8.17-201ENST00000391292 132 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 AL356535.1-201ENST00000440335 398 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 RPS3P1-201ENST00000456781 192 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 RNU7-164P-201ENST00000459221 62 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 AC025554.1-201ENST00000505641 188 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 MIR7702-201ENST00000621931 59 ntBASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.34□□□□□ -1.55
TRIM35Q9UPQ4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRIM35Q9UPQ4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
TRIM35Q9UPQ4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.34□□□□□ -1.56
TRIM35Q9UPQ4 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 SPRR2C-201ENST00000290702 219 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 RNA5SP283-201ENST00000365604 119 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.454-201ENST00000384224 113 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 AL117339.2-201ENST00000430475 180 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 RPS4XP11-201ENST00000446897 772 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 RNU7-57P-201ENST00000459540 60 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 NDUFA4P2-201ENST00000489989 244 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 RNU7-123P-201ENST00000515911 60 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 AC022523.2-201ENST00000561045 150 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 MIR4668-201ENST00000582284 70 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 MIR6868-201ENST00000611215 58 ntBASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.33□□□□□ -1.56
TRIM35Q9UPQ4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-832P-201ENST00000363319 107 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.507-201ENST00000384500 99 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 RNU6-750P-201ENST00000390946 107 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 RPL21P65-201ENST00000406094 466 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 Y_RNA.611-201ENST00000410682 108 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 AC092017.2-201ENST00000427600 362 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 RPS29P20-201ENST00000489592 171 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 MRPS17P9-201ENST00000511924 393 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 AC106785.1-201ENST00000565935 262 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 MIR548Z-201ENST00000584743 97 ntBASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM35Q9UPQ4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM35Q9UPQ4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms