Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL050341.1-201ENST00000447743 313 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC010469.2-201ENST00000496412 480 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC090502.2-201ENST00000549267 280 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 RPL23AP91-201ENST00000569211 455 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC023827.1-201ENST00000569247 97 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC087685.1-201ENST00000587507 141 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL390123.1-201ENST00000603216 237 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL136310.1-201ENST00000404926 654 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC010154.1-201ENST00000425857 269 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 RPS29P15-201ENST00000458329 171 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC048346.1-201ENST00000510247 144 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL591926.4-201ENST00000616895 298 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 AL450472.1-202ENST00000637286 180 ntBASIC-0.68□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 RNU6-619P-201ENST00000365146 108 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 RNU6-925P-201ENST00000384629 104 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 SNRPEP8-201ENST00000442866 260 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 ELOCP30-201ENST00000447108 299 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 TPT1P7-201ENST00000458300 517 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 RNU6-143P-201ENST00000516942 93 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 AC009902.1-201ENST00000519351 183 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 AC024995.1-201ENST00000523014 93 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 MRPS36P4-201ENST00000534436 298 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 AC018889.1-201ENST00000605372 397 ntBASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
SCN11AQ9UI33 RNU6-652P-201ENST00000365488 107 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 RNU6-416P-201ENST00000516265 103 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 RNU6-180P-201ENST00000516697 61 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 SNRPGP1-201ENST00000553864 222 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 LARP7P2-201ENST00000575306 125 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 SNORA25.18-201ENST00000607153 114 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 RN7SL660P-201ENST00000614852 299 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 RNU6-359P-201ENST00000365466 108 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 SNORA12.2-201ENST00000391040 156 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AC010153.1-201ENST00000432862 727 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AC026782.1-201ENST00000512952 449 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 MIR4263-201ENST00000584745 83 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AF038458.1-201ENST00000588406 262 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 MTND3P19-201ENST00000603825 345 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AL355297.3-201ENST00000604082 446 ntBASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.7□□□□□ -2.52
SCN11AQ9UI33 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC083799.1-201ENST00000366451 910 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 RNU6-166P-201ENST00000384371 107 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 SNORA8.2-201ENST00000384372 139 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 MIR1185-1-201ENST00000408598 86 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC013262.1-201ENST00000426710 252 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 MTCO3P43-201ENST00000440974 771 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC114982.2-201ENST00000461396 358 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC090615.1-201ENST00000577519 154 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 MIR3612-201ENST00000579753 87 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 BNIP3P30-201ENST00000601184 574 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AC092656.1-203ENST00000624134 423 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 AL359697.1-201ENST00000624879 587 ntBASIC-0.71□□□□□ -2.52
SCN11AQ9UI33 Y_RNA.548-201ENST00000384656 105 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 SNORD75.1-201ENST00000408373 60 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 MTCO2P5-201ENST00000422621 426 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 MED13P1-201ENST00000428342 171 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 MRPL42P4-201ENST00000453267 443 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 RNU6-1041P-201ENST00000516254 102 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AC004584.2-201ENST00000570407 410 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 MIR4300-201ENST00000581016 96 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 BNIP3P9-201ENST00000603714 553 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AC006504.8-201ENST00000621046 635 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 AL162726.3-218ENST00000636401 95 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 SGO1P1-201ENST00000603525 1447 ntBASIC-0.72□□□□□ -2.52
SCN11AQ9UI33 MIR660-201ENST00000385235 97 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 SNORD41-201ENST00000386967 70 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 RNU6-994P-201ENST00000410507 111 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 AC019178.2-201ENST00000423595 505 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 AC114981.1-201ENST00000503897 678 ntBASIC-0.73□□□□□ -2.53
SCN11AQ9UI33 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms