Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RNU5B-2P-201ENST00000363036 113 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 Y_RNA.288-201ENST00000364854 92 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 Y_RNA.307-201ENST00000365022 117 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 Y_RNA.358-201ENST00000365491 99 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 RNU6-708P-201ENST00000384217 107 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 Y_RNA.461-201ENST00000384263 103 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 RN7SKP61-201ENST00000410642 295 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 RNU6-130P-201ENST00000411112 103 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.15□□□□□ -1.91
USP25Q9UHP3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.15□□□□□ -1.91
USP25Q9UHP3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.15□□□□□ -1.91
USP25Q9UHP3 AC073901.1-201ENST00000462471 408 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 AF186996.7-201ENST00000492781 209 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 AC091826.1-201ENST00000514065 313 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 AC023157.2-201ENST00000540596 141 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.15□□□□□ -1.91
USP25Q9UHP3 MIR5571-201ENST00000577998 113 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 ZNF861P-201ENST00000588126 639 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 AC090425.1-201ENST00000610007 140 ntBASIC3.15□□□□□ -1.91
USP25Q9UHP3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
USP25Q9UHP3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.14□□□□□ -1.91
USP25Q9UHP3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.14□□□□□ -1.91
USP25Q9UHP3 Y_RNA.19-201ENST00000362462 99 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 Y_RNA.222-201ENST00000364264 102 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 Y_RNA.458-201ENST00000384240 102 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 USP9YP16-201ENST00000430287 407 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AL353705.4-201ENST00000449661 238 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 USP9YP23-201ENST00000455085 407 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AC140059.1-201ENST00000489238 361 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AC104564.1-201ENST00000493028 407 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 RNU6-397P-201ENST00000516226 104 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.14□□□□□ -1.91
USP25Q9UHP3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
USP25Q9UHP3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.14□□□□□ -1.91
USP25Q9UHP3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.14□□□□□ -1.91
USP25Q9UHP3 RPL30P11-203ENST00000598995 310 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AL356575.1-201ENST00000603008 283 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 AC010297.1-201ENST00000623948 149 ntBASIC3.14□□□□□ -1.91
USP25Q9UHP3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP25Q9UHP3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 Y_RNA.26-201ENST00000362539 101 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 Y_RNA.64-201ENST00000362845 102 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 RNU6-1210P-201ENST00000363775 107 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 RNU6-806P-201ENST00000365147 105 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 RNU6-142P-201ENST00000384019 107 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 SNORA29-201ENST00000384183 140 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 MT-TW-201ENST00000387382 68 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 UBA52P6-201ENST00000399822 382 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 MIR1302-6-201ENST00000408466 90 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 LINC01399-202ENST00000458450 244 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 RNU7-87P-201ENST00000459343 62 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 TOMM22P6-201ENST00000465035 409 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 AL049873.1-201ENST00000480540 376 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC010469.2-201ENST00000496412 480 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 Y_RNA.713-201ENST00000517013 96 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 MIR4513-201ENST00000581077 86 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 MIR5739-201ENST00000619803 80 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
USP25Q9UHP3 U6.92-201ENST00000636464 89 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 U6.104-201ENST00000637979 90 ntBASIC3.13□□□□□ -1.91
USP25Q9UHP3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.13□□□□□ -1.91
USP25Q9UHP3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 Z82195.2-201ENST00000612348 18351 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
USP25Q9UHP3 RNU6-379P-201ENST00000363813 104 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 Y_RNA.376-201ENST00000365638 108 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 MIR153-2-201ENST00000385225 87 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 RNU1-139P-201ENST00000391307 165 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 SNORD127-201ENST00000458892 86 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 U8.22-201ENST00000459141 133 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 AP001486.1-201ENST00000463339 476 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 AC087477.1-201ENST00000465747 340 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 AL121594.1-201ENST00000475906 575 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 AC109329.2-201ENST00000519658 482 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 MIR4298-201ENST00000584380 73 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 AC137590.2-201ENST00000619709 240 ntBASIC3.12□□□□□ -1.91
USP25Q9UHP3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
USP25Q9UHP3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
USP25Q9UHP3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
USP25Q9UHP3 Y_RNA.40-201ENST00000362645 93 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 Y_RNA.483-201ENST00000384380 101 ntBASIC3.11□□□□□ -1.91
USP25Q9UHP3 Y_RNA.489-201ENST00000384410 101 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms