Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.94□□□□□ -1.94
DKK3Q9UBP4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.94□□□□□ -1.94
DKK3Q9UBP4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.64-201ENST00000362845 102 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 MT-TW-201ENST00000387382 68 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 RNU6-750P-201ENST00000390946 107 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 RPS26P42-201ENST00000413485 326 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AL365496.1-201ENST00000426885 215 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AC016700.2-201ENST00000446011 156 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 LINC01399-202ENST00000458450 244 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 RNA5SP356-201ENST00000515972 94 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AC115990.1-201ENST00000526957 301 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AC023157.2-201ENST00000540596 141 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AC090616.3-201ENST00000582184 217 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.93□□□□□ -1.94
DKK3Q9UBP4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AL136360.1-201ENST00000503377 1900 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
DKK3Q9UBP4 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AC010889.1-201ENST00000566193 2666 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.26-201ENST00000362539 101 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 RNU6-806P-201ENST00000365147 105 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 RNU6-1318P-201ENST00000365389 103 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 Y_RNA.439-201ENST00000384119 94 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AL358075.3-201ENST00000426289 226 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AC107626.1-201ENST00000471084 183 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 SNORA31.15-201ENST00000516771 132 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AP003733.2-201ENST00000529409 171 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 AC027288.2-201ENST00000553028 243 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 MIR3668-201ENST00000582138 75 ntBASIC2.92□□□□□ -1.94
DKK3Q9UBP4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.92□□□□□ -1.94
DKK3Q9UBP4 RNU6-1159P-201ENST00000362933 107 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RNU1-138P-201ENST00000384093 164 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RNU6-907P-201ENST00000390924 102 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RNU6-121P-201ENST00000410525 99 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RPS15AP7-201ENST00000439294 405 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AL441985.1-201ENST00000457727 251 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 SNORD127-201ENST00000458892 86 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AP000870.1-201ENST00000472927 406 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RPL30P12-201ENST00000474666 353 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 RNU6-567P-201ENST00000516746 107 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AC022868.1-201ENST00000517767 391 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AL391813.1-201ENST00000603098 260 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AL049779.4-201ENST00000604500 156 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AL138963.2-201ENST00000605137 226 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AC240442.1-201ENST00000616055 283 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 AC135776.4-201ENST00000624300 1904 ntBASIC2.91□□□□□ -1.94
DKK3Q9UBP4 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.91□□□□□ -1.94
DKK3Q9UBP4 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
DKK3Q9UBP4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
DKK3Q9UBP4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-222P-201ENST00000362438 107 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-1010P-201ENST00000362757 107 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.105-201ENST00000363182 111 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-379P-201ENST00000363813 104 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.307-201ENST00000365022 117 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.319-201ENST00000365138 92 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 SNORD115-46-201ENST00000390982 71 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 SNORD78.2-201ENST00000391076 69 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-159P-201ENST00000391080 106 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 MRPL35P1-201ENST00000404272 572 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNA5SP508-201ENST00000411327 119 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC012306.1-201ENST00000423267 114 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC139712.2-201ENST00000424302 339 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AL135938.1-201ENST00000443141 297 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC096638.1-201ENST00000444678 216 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-1132P-201ENST00000459214 107 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 SNRPGP7-201ENST00000469016 106 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 MRPS36P2-201ENST00000512569 299 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 RNU6-58P-201ENST00000517143 103 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.9□□□□□ -1.95
DKK3Q9UBP4 AC025281.1-201ENST00000567026 265 ntBASIC2.9□□□□□ -1.95
DKK3Q9UBP4 MIR3117-201ENST00000584034 78 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms