Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 MTND5P9-201ENST00000503854 1755 ntBASIC2.07□□□□□ -2.08
CPSF2Q9P2I0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 SNORA8-201ENST00000384574 139 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC004866.1-201ENST00000411748 78 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC244636.1-201ENST00000421152 228 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 Z82188.1-201ENST00000436709 154 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 MTATP6P13-201ENST00000438531 667 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC004386.2-201ENST00000441858 148 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC007215.1-201ENST00000464893 276 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 FO393415.2-201ENST00000480085 343 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC010928.2-201ENST00000588017 287 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 TCL6_2.1-201ENST00000615162 119 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AC137590.2-201ENST00000619709 240 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 AL133216.2-202ENST00000634512 349 ntBASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CPSF2Q9P2I0 RNU4-9P-201ENST00000364951 139 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 RNU6-510P-201ENST00000391239 108 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AL139396.1-201ENST00000421137 167 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 MTCO3P46-201ENST00000425787 232 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AC010531.2-201ENST00000465012 153 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AC018710.1-201ENST00000506509 158 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 MIR5006-201ENST00000583027 110 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AC022513.1-201ENST00000624512 117 ntBASIC2.05□□□□□ -2.08
CPSF2Q9P2I0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 RNU6-545P-201ENST00000362681 104 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 Y_RNA.72-201ENST00000362894 103 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 RNU6-1059P-201ENST00000363752 98 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 SNORD115-32-201ENST00000364079 82 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 Y_RNA.248-201ENST00000364501 109 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 MTCO1P44-201ENST00000441935 243 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 MTCO3P8-201ENST00000453691 755 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 PPP1R2P5-201ENST00000457256 603 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 MTND5P5-201ENST00000503764 376 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 RNU1-54P-201ENST00000517181 120 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 AP000889.1-201ENST00000530968 660 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 RMST_6.1-201ENST00000611980 203 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 MIR6128-201ENST00000615528 109 ntBASIC2.04□□□□□ -2.08
CPSF2Q9P2I0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 RNU6-596P-201ENST00000365395 98 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 SNORA48.1-201ENST00000390879 135 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 MIR1283-1-201ENST00000408494 87 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 RNU6-174P-201ENST00000410406 106 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 MTND3P8-201ENST00000412909 339 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AC243428.1-201ENST00000421099 264 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 USP9YP30-201ENST00000430729 455 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AC009237.7-201ENST00000447357 229 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AC007395.1-201ENST00000451333 677 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AC116337.1-201ENST00000509680 687 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 RNVU1-2-201ENST00000516326 135 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 SNRPGP18-201ENST00000553000 214 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 MIR5696-201ENST00000578474 85 ntBASIC2.03□□□□□ -2.08
CPSF2Q9P2I0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 BX322639.1-202ENST00000423987 2213 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 MTND4P5-201ENST00000435821 1374 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 Y_RNA.533-201ENST00000384596 114 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 MIR32-201ENST00000384965 70 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 AL445685.2-201ENST00000422551 342 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 HSPE1P21-201ENST00000438283 308 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 MIR4435-1-201ENST00000582552 80 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 AC005786.1-201ENST00000588553 154 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 AL158827.2-201ENST00000602494 330 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 U1.36-201ENST00000620684 176 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 AL691447.3-201ENST00000635020 330 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 ZNF204P-201ENST00000416749 2397 ntBASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CPSF2Q9P2I0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.01□□□□□ -2.09
CPSF2Q9P2I0 CBX3P1-201ENST00000325243 554 ntBASIC2.01□□□□□ -2.09
CPSF2Q9P2I0 SNORD115-8-201ENST00000363856 82 ntBASIC2.01□□□□□ -2.09
CPSF2Q9P2I0 SNORD115-38-201ENST00000365037 82 ntBASIC2.01□□□□□ -2.09
CPSF2Q9P2I0 RNU6-842P-201ENST00000384269 107 ntBASIC2.01□□□□□ -2.09
CPSF2Q9P2I0 MIR300-201ENST00000401138 83 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms