Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CD24P4-201ENST00000382840 243 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.446-201ENST00000384178 104 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 SNORA12-201ENST00000391162 147 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 SNORD58.1-201ENST00000391313 66 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 RNU2-64P-201ENST00000411315 191 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC004866.1-201ENST00000411748 78 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 POLR2KP2-201ENST00000438155 177 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 Z75741.1-201ENST00000446793 314 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 MRPS10P1-201ENST00000448483 130 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 RN7SL807P-201ENST00000470923 297 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC104027.1-201ENST00000521887 300 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC130289.1-201ENST00000577321 73 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 MIR5006-201ENST00000583027 110 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AL109918.3-201ENST00000603072 338 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC004467.1-201ENST00000615678 330 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 AC073476.4-201ENST00000628409 72 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 MAPK10-322ENST00000641485 4530 ntBASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
KCMF1Q9P0J7 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.383-201ENST00000383855 97 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 RNU6-514P-201ENST00000384208 107 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 SNORA9-201ENST00000384215 133 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 RPL19P1-201ENST00000411635 428 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 EIF4EP4-201ENST00000424916 578 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 RNU6-107P-201ENST00000516643 102 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC103810.1-201ENST00000579873 453 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 RPL30P11-203ENST00000598995 310 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 AC022441.3-201ENST00000605737 136 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 MIR3651-201ENST00000630427 90 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
KCMF1Q9P0J7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.101-201ENST00000363154 102 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 SNORA38.1-201ENST00000364172 131 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 RNY1-201ENST00000364228 113 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 RNU6-1083P-201ENST00000384022 107 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 SNORA48.8-201ENST00000391324 134 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC005042.3-201ENST00000453230 174 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 RNA5SP112-201ENST00000515937 99 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 RNU6-966P-201ENST00000516479 104 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 RNU1-117P-201ENST00000517041 158 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC022080.3-201ENST00000544433 482 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC008739.2-201ENST00000597006 317 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 MIR7112-201ENST00000616126 65 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC091953.5-201ENST00000622919 233 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC091932.3-201ENST00000624223 323 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 AC090517.3-201ENST00000625170 141 ntBASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
KCMF1Q9P0J7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 MIR410-201ENST00000362222 80 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.274-201ENST00000364714 101 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 RNU6-740P-201ENST00000364734 105 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 SNORD87-201ENST00000364849 89 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.297-201ENST00000364950 91 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 Y_RNA.418-201ENST00000384029 102 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 RNU6-209P-201ENST00000384118 107 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 AC091179.1-201ENST00000461606 579 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 AC140059.1-201ENST00000489238 361 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 RNU2-44P-201ENST00000516795 194 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 RN7SKP57-201ENST00000517248 293 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 AP002001.1-203ENST00000534002 267 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 RPL21P9-201ENST00000556149 474 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 MIR5680-201ENST00000577577 84 ntBASIC3.05□□□□□ -1.92
KCMF1Q9P0J7 MIR3200-201ENST00000580767 85 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms