Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 AC009994.1-201ENST00000606889 253 ntBASIC1.48□□□□□ -2.17
SMPD3Q9NY59 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SMPD3Q9NY59 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.48□□□□□ -2.17
SMPD3Q9NY59 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.48□□□□□ -2.17
SMPD3Q9NY59 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.48□□□□□ -2.17
SMPD3Q9NY59 AC245060.5-201ENST00000610778 3293 ntBASIC1.48□□□□□ -2.17
SMPD3Q9NY59 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AP000648.3-201ENST00000623539 4507 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 MIR340-201ENST00000362125 95 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 Y_RNA.38-201ENST00000362617 102 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RNU6-451P-201ENST00000362921 107 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 Y_RNA.123-201ENST00000363338 102 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 MIR181A1-201ENST00000385026 110 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 Y_RNA.615-201ENST00000410769 117 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 MTCO1P20-201ENST00000425366 358 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 NDUFA5P4-201ENST00000436704 385 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 snoU13.6-201ENST00000458785 104 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RNU7-14P-201ENST00000459331 62 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 TOMM22P6-201ENST00000465035 409 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RPS29P21-201ENST00000496272 170 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RNU6-1098P-201ENST00000516772 96 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 RNA5SP481-201ENST00000516814 122 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC109635.3-201ENST00000529536 185 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC110588.1-201ENST00000559699 137 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AC093783.1-201ENST00000612976 329 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 MTND5P10-201ENST00000603719 1809 ntBASIC1.47□□□□□ -2.17
SMPD3Q9NY59 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SMPD3Q9NY59 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 SNORD33-201ENST00000362761 85 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 RNU6-254P-201ENST00000363377 107 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 SNORD113-7-201ENST00000363762 77 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 RNU6-1090P-201ENST00000364065 94 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.318-201ENST00000365131 97 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 RNU6-128P-201ENST00000383976 107 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 SNORA29-201ENST00000384183 140 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 MIR521-1-201ENST00000384902 87 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC069257.2-201ENST00000441819 155 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AL513124.1-201ENST00000450410 614 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 HMGN2P26-201ENST00000463169 339 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 RPL26P26-201ENST00000480251 434 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 RPS23P5-201ENST00000495419 428 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC146944.4-201ENST00000602697 718 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC104458.1-201ENST00000608243 463 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AL359697.1-201ENST00000624879 587 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AL159152.1-201ENST00000635019 2587 ntBASIC1.46□□□□□ -2.18
SMPD3Q9NY59 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 SNORD114-1-201ENST00000362705 72 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RNU4-40P-201ENST00000364351 143 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.256-201ENST00000364594 104 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RNU6-1286P-201ENST00000383871 107 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RNU6-968P-201ENST00000384076 107 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RNA5SP494-201ENST00000410653 129 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 SNRPEP10-201ENST00000420249 274 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 C8orf59P1-201ENST00000429930 303 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 TRBVA-201ENST00000498804 316 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 RNU6-902P-201ENST00000517212 91 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 ZNF519P2-201ENST00000557032 169 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.45□□□□□ -2.18
SMPD3Q9NY59 FGF7P1-201ENST00000582820 288 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 CTHRC1P1-201ENST00000605383 469 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 MIR8076-201ENST00000611401 83 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 AC083806.3-201ENST00000614016 455 ntBASIC1.45□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.9-201ENST00000362354 101 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU5B-2P-201ENST00000363036 113 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU6-1252P-201ENST00000363054 104 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.132-201ENST00000363421 102 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU6-1019P-201ENST00000364424 107 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 SNORA18.2-201ENST00000383865 132 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 Y_RNA.402-201ENST00000383972 102 ntBASIC1.44□□□□□ -2.18
SMPD3Q9NY59 RNU2-7P-201ENST00000410794 178 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms