Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SMPD4Q9NXE4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 AC110491.1-201ENST00000562191 2010 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RNU6-527P-201ENST00000363425 104 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RNU6-1255P-201ENST00000363434 112 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 Z98749.2-208ENST00000381646 500 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RNU6-80P-201ENST00000384195 107 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RNU6-381P-201ENST00000391259 108 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RNA5SP293-201ENST00000410527 113 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 RPL30P13-201ENST00000418873 348 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 EBAG9P1-201ENST00000418955 543 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 KC877373.1-201ENST00000479066 408 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SMPD4Q9NXE4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AC007496.3-201ENST00000624987 3443 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 RNU6-942P-201ENST00000363002 107 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 RNU6-805P-201ENST00000365643 106 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 Y_RNA.420-201ENST00000384043 110 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 SNORA36A-201ENST00000384221 132 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 RNY4P18-201ENST00000391107 89 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 RPL23AP95-201ENST00000426806 265 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 ARF4P2-201ENST00000430209 526 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 HMGN1P18-201ENST00000457642 277 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 S100A11P2-201ENST00000467589 312 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AC008885.1-201ENST00000514930 301 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 RNA5SP170-201ENST00000517150 101 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 CYCSP39-201ENST00000565821 309 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 SRP72P2-201ENST00000344851 1979 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AC008568.2-201ENST00000623862 2313 ntBASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMPD4Q9NXE4 AL672296.1-201ENST00000427780 2158 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 RNA5SP295-201ENST00000362655 121 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 SNORD115-8-201ENST00000363856 82 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 SNORD115-38-201ENST00000365037 82 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 SNORA7.4-201ENST00000384249 137 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.525-201ENST00000384570 113 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 MIR888-201ENST00000401186 77 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AP000705.1-201ENST00000454567 350 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 Y_RNA.797-201ENST00000515977 94 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC022616.8-201ENST00000533569 253 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 MIR4431-201ENST00000579990 94 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC024153.1-201ENST00000603103 365 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC027309.3-201ENST00000623419 351 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC091932.3-201ENST00000624223 323 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC091152.2-201ENST00000591628 2569 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 AC004925.1-201ENST00000624256 2706 ntBASIC3.27□□□□□ -1.89
SMPD4Q9NXE4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 DEFB108F-201ENST00000344638 222 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU6-834P-201ENST00000362367 110 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU6-873P-201ENST00000363833 107 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU6-899P-201ENST00000363947 107 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 U3.37-201ENST00000408528 213 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU2-68P-201ENST00000410878 191 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 snoU13.6-201ENST00000458785 104 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU7-197P-201ENST00000458836 62 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 U8.19-201ENST00000459095 133 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 CYCTP-201ENST00000504253 315 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 RNU6-659P-201ENST00000516454 104 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 DNAJC19P2-201ENST00000593340 302 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 AC004467.1-201ENST00000615678 330 ntBASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SMPD4Q9NXE4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMPD4Q9NXE4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 168.7 ms