Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
ZCCHC3Q9NUD5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 SNORD50.1-201ENST00000362987 71 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.132-201ENST00000363421 102 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.450-201ENST00000384198 113 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 MIR1283-1-201ENST00000408494 87 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AL590632.1-201ENST00000424289 371 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC004386.2-201ENST00000441858 148 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC079354.2-201ENST00000453523 154 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 PCMTD1P1-201ENST00000455560 355 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC087477.1-201ENST00000465747 340 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 SUMO2P18-201ENST00000518873 252 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 HSBP1P1-201ENST00000555205 166 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 MIR5094-201ENST00000578766 85 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 MIR5006-201ENST00000583027 110 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AP000907.4-201ENST00000604143 237 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC116312.1-201ENST00000606841 314 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AC137590.2-201ENST00000619709 240 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 AL359697.1-201ENST00000624879 587 ntBASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.69□□□□□ -2.14
ZCCHC3Q9NUD5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC245060.5-201ENST00000610778 3293 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-790P-201ENST00000384479 105 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC004866.1-201ENST00000411748 78 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AL513185.2-201ENST00000425543 193 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 C8orf59P1-201ENST00000429930 303 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 HSPE1P21-201ENST00000438283 308 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 DAP3P1-201ENST00000441522 278 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AL353572.1-201ENST00000442490 417 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC009237.7-201ENST00000447357 229 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC067942.3-201ENST00000512025 362 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 RPL23AP94-201ENST00000512518 302 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-856P-201ENST00000516959 98 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 MIR4513-201ENST00000581077 86 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC023043.2-201ENST00000589678 1026 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 AC083806.3-201ENST00000614016 455 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 U4.5-201ENST00000617137 123 ntBASIC1.68□□□□□ -2.14
ZCCHC3Q9NUD5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.89-201ENST00000363031 102 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-112P-201ENST00000363599 104 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-877P-201ENST00000383868 107 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-418P-201ENST00000384035 107 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.516-201ENST00000384541 124 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 MIR549A-201ENST00000385268 96 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 AL358453.1-201ENST00000422522 250 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 MTCO3P8-201ENST00000453691 755 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 MTCO2P30-201ENST00000503662 364 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 AC091435.1-201ENST00000505442 584 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 SNORA31.17-201ENST00000516953 127 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 MIR4753-201ENST00000585119 83 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 AC090617.10-201ENST00000624308 134 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 SCARNA4-201ENST00000629045 128 ntBASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.67□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-661P-201ENST00000362409 107 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 SNORD114-1-201ENST00000362705 72 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 Y_RNA.212-201ENST00000364177 102 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 RNA5SP126-201ENST00000365092 109 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 U8.10-201ENST00000384260 133 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 AC099677.2-201ENST00000436385 175 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 RPS29P11-201ENST00000496507 171 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 RRN3P3-201ENST00000549207 578 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 SNRPGP20-201ENST00000604477 205 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 AC009318.2-201ENST00000610917 651 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 MTND4P5-201ENST00000435821 1374 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 BX322639.1-202ENST00000423987 2213 ntBASIC1.66□□□□□ -2.14
ZCCHC3Q9NUD5 RNU6-534P-201ENST00000364877 106 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 RNU4-12P-201ENST00000365233 139 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 RNU6-296P-201ENST00000384608 107 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 Y_RNA.573-201ENST00000384763 105 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 MIR517A-201ENST00000385001 87 ntBASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.65□□□□□ -2.15
ZCCHC3Q9NUD5 HMGB1P18-201ENST00000438801 619 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms