Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC090897.2-201ENST00000581715 130 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AL078605.1-201ENST00000603529 500 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AL590240.4-201ENST00000616908 390 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 AC073476.4-201ENST00000628409 72 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 RBBP8P1-201ENST00000449447 1844 ntBASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
PDLIM7Q9NR12 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 RNU6-1027P-201ENST00000383998 107 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 MIR549A-201ENST00000385268 96 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 SNORA46.1-201ENST00000391069 153 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 RNA5SP390-201ENST00000410191 113 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC019205.3-201ENST00000424573 156 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC112220.1-201ENST00000434628 355 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC007395.1-201ENST00000451333 677 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 SNORA31.16-201ENST00000516773 139 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 SCARNA20.6-201ENST00000517251 106 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AC021753.1-201ENST00000635724 168 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 ZNF204P-201ENST00000416749 2397 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 MAPK10-362ENST00000641864 4484 ntBASIC3.54□□□□□ -1.84
PDLIM7Q9NR12 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC007496.3-201ENST00000624987 3443 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 RNU6-923P-201ENST00000364753 107 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 RNU6-622P-201ENST00000384272 103 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 MIR184-201ENST00000384962 84 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 RNA5SP354-201ENST00000391247 136 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 RPS26P42-201ENST00000413485 326 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AL139281.1-201ENST00000422120 335 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 CST9LP2-201ENST00000437612 320 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC009237.7-201ENST00000447357 229 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.662-201ENST00000516028 97 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 RNY3P16-201ENST00000516338 101 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 HMGN2P15-201ENST00000585707 270 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 MZT1P2-201ENST00000604387 248 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC022441.3-201ENST00000605737 136 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 AC091564.4-201ENST00000533934 2194 ntBASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PDLIM7Q9NR12 MTND5P35-201ENST00000557537 1720 ntBASIC3.53□□□□□ -1.85
PDLIM7Q9NR12 AL109809.4-201ENST00000603520 2185 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 SNORA72.2-201ENST00000365028 127 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 RNU6-918P-201ENST00000391219 106 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AL139132.1-201ENST00000431587 344 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC090525.1-201ENST00000479116 478 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 RNU6-966P-201ENST00000516479 104 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC233702.2-202ENST00000562547 291 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AC005828.6-201ENST00000606610 232 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 uc_338.25-201ENST00000613756 156 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 U7.8-201ENST00000619968 63 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 MIR3199-2-201ENST00000636243 86 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 AL136360.1-201ENST00000503377 1900 ntBASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PDLIM7Q9NR12 MAPK10-322ENST00000641485 4530 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.170-201ENST00000363746 110 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.179-201ENST00000363844 90 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 Y_RNA.233-201ENST00000364407 101 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 EEF1A1P41-201ENST00000414667 207 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 UQCRBP2-201ENST00000447827 297 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC005042.3-201ENST00000453230 174 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 SNORD2.1-201ENST00000458762 69 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 RNU6-625P-201ENST00000459412 107 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 RPS29P26-201ENST00000477483 171 ntBASIC3.51□□□□□ -1.85
PDLIM7Q9NR12 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms