Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MYL12BP1-201ENST00000569826 507 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AL137847.3-201ENST00000611521 109 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AL450472.1-202ENST00000637286 180 ntBASIC2.47□□□□□ -2.01
DDX4Q9NQI0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
DDX4Q9NQI0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
DDX4Q9NQI0 RNU6-1159P-201ENST00000362933 107 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 SNORD115-32-201ENST00000364079 82 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RNU6-1040P-201ENST00000383974 107 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RNU6-890P-201ENST00000384121 107 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RNA5SP494-201ENST00000410653 129 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RPS26P42-201ENST00000413485 326 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC012306.1-201ENST00000423267 114 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 CYP2C59P-201ENST00000457790 269 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RPL17P19-201ENST00000489069 552 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC140059.1-201ENST00000489238 361 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 SNORA31.16-201ENST00000516773 139 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 MRPS36P4-201ENST00000534436 298 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC093249.1-201ENST00000567049 203 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 MIR3923-201ENST00000579521 83 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 Z98751.3-201ENST00000604447 521 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC008121.3-201ENST00000618726 433 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 MIR5739-201ENST00000619803 80 ntBASIC2.46□□□□□ -2.02
DDX4Q9NQI0 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
DDX4Q9NQI0 RNY1P16-201ENST00000363063 111 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNA5SP240-201ENST00000365355 128 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNU6-331P-201ENST00000384724 107 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNU6-700P-201ENST00000391043 107 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNU6-1304P-201ENST00000411374 106 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 CYCSP49-201ENST00000420810 319 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 UBE2V1P7-201ENST00000446395 340 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RPL23AP75-201ENST00000491601 451 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.45□□□□□ -2.02
DDX4Q9NQI0 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AC080078.3-201ENST00000605407 463 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 RMST_6.1-201ENST00000611980 203 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AC005520.5-201ENST00000613926 164 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AC245884.12-201ENST00000615364 59 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DDX4Q9NQI0 AC006026.1-201ENST00000444025 1803 ntBASIC2.45□□□□□ -2.02
DDX4Q9NQI0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 RNU1-72P-201ENST00000362976 153 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 RNU6-490P-201ENST00000362985 107 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 MTCYBP10-201ENST00000424905 650 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 snoU13.30-201ENST00000458951 104 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC087477.1-201ENST00000465747 340 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC068781.1-201ENST00000488231 618 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC021146.2-201ENST00000504736 556 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 RNU7-175P-201ENST00000515915 61 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 RNU6-470P-201ENST00000515954 104 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 SUB1P3-201ENST00000564581 315 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC104581.2-201ENST00000572227 430 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 MIR5701-3-201ENST00000578890 82 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 MIR5701-1-201ENST00000585138 82 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AL078605.1-201ENST00000603529 500 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AL713866.2-201ENST00000603579 219 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AC005014.2-201ENST00000607795 599 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 MIR6845-201ENST00000613182 61 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 MIR5701-2-201ENST00000615634 82 ntBASIC2.44□□□□□ -2.02
DDX4Q9NQI0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DDX4Q9NQI0 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 RNU4-76P-201ENST00000364509 141 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 SNORA36A-201ENST00000384221 132 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 Y_RNA.579-201ENST00000390939 94 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 RNU2-63P-201ENST00000410792 194 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC007098.1-201ENST00000420122 367 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AL603825.1-201ENST00000438481 80 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 OR2AQ1P-201ENST00000451972 200 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AF186996.7-201ENST00000492781 209 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 CKS1BP2-201ENST00000497342 240 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 AC022493.2-201ENST00000506122 481 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 RNU6-976P-201ENST00000516086 111 ntBASIC2.43□□□□□ -2.02
DDX4Q9NQI0 RNU6-295P-201ENST00000516901 104 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms