Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR3136-201ENST00000583498 78 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC092447.9-201ENST00000603395 144 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 SCARNA4-201ENST00000629045 128 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 AC005336.3-201ENST00000623833 2679 ntBASIC2.37□□□□□ -2.03
PCDH9Q9HC56 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PCDH9Q9HC56 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR449A-201ENST00000362113 91 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNA5SP289-201ENST00000362332 137 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNU4-82P-201ENST00000362443 140 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNU6-1159P-201ENST00000362933 107 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.80-201ENST00000362996 102 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.112-201ENST00000363250 102 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 SNORA22B-201ENST00000383876 138 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.485-201ENST00000384395 102 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.500-201ENST00000384466 111 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNU6-541P-201ENST00000384709 110 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR625-201ENST00000385047 85 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR549A-201ENST00000385268 96 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNU6-1093P-201ENST00000391194 107 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR190B-201ENST00000401119 79 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR208B-201ENST00000401172 77 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AL445305.1-201ENST00000432577 575 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC099799.1-201ENST00000439809 192 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RN7SKP295-201ENST00000517264 153 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 RNU6-988P-201ENST00000519081 107 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC104581.2-201ENST00000572227 430 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 MIR3923-201ENST00000579521 83 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC100812.1-201ENST00000607622 580 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC040896.1-201ENST00000613819 479 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AC245884.12-201ENST00000615364 59 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 IGHVIII-44-202ENST00000636235 289 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
PCDH9Q9HC56 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
PCDH9Q9HC56 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC010329.5-201ENST00000623497 2174 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RNU6-874P-201ENST00000362390 105 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RNU1-72P-201ENST00000362976 153 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.202-201ENST00000364083 110 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.252-201ENST00000364556 101 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RNU6-378P-201ENST00000384324 107 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RNY1P14-201ENST00000384426 108 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 SNORA26.3-201ENST00000391119 136 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 CBX3P9-201ENST00000402326 552 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AL590004.1-201ENST00000405321 300 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC018865.2-201ENST00000423631 129 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC018634.1-201ENST00000437554 401 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 SNORA59A-201ENST00000459326 152 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RNU6-567P-201ENST00000516746 107 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.711-201ENST00000516993 102 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 HSPE1P18-201ENST00000517602 280 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC016256.1-201ENST00000547971 354 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC016925.2-201ENST00000605108 242 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 AC083806.3-201ENST00000614016 455 ntBASIC2.35□□□□□ -2.03
PCDH9Q9HC56 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.35□□□□□ -2.03
PCDH9Q9HC56 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDH9Q9HC56 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 MTND4P1-201ENST00000457501 1466 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC080100.1-201ENST00000624239 5356 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 RNU6-222P-201ENST00000362438 107 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.28-201ENST00000362554 111 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 RNU4-15P-201ENST00000362613 141 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.106-201ENST00000363189 100 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 Y_RNA.358-201ENST00000365491 99 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 MICF-203ENST00000432679 129 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 IFNA11P-201ENST00000446352 526 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 RNU7-4P-201ENST00000516961 62 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 CYP4A27P-201ENST00000567218 190 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC105245.1-201ENST00000581934 244 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 MIR7157-201ENST00000635801 60 ntBASIC2.34□□□□□ -2.03
PCDH9Q9HC56 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PCDH9Q9HC56 MTND5P16-201ENST00000460269 1703 ntBASIC2.34□□□□□ -2.04
PCDH9Q9HC56 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.326-201ENST00000365176 113 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 Y_RNA.364-201ENST00000365532 101 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 MIR153-2-201ENST00000385225 87 ntBASIC2.33□□□□□ -2.04
PCDH9Q9HC56 SNORA69.1-201ENST00000390904 137 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms