Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 RNU6-1213P-201ENST00000517075 94 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 MIR4529-201ENST00000578110 78 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 POLR3GP2-201ENST00000588366 668 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC011494.1-201ENST00000596454 237 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC019193.3-201ENST00000609144 554 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 AC009318.2-201ENST00000610917 651 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 MIR6128-201ENST00000615528 109 ntBASIC1.6□□□□□ -2.15
NANOGQ9H9S0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
NANOGQ9H9S0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 Y_RNA.88-201ENST00000363029 99 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 RNU6-784P-201ENST00000384330 106 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 RNU6-790P-201ENST00000384479 105 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 SNORA40.18-201ENST00000391200 128 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 RNU6-510P-201ENST00000391239 108 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 BTF3L4P2-201ENST00000392798 346 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AL512604.1-201ENST00000404812 257 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 RNU2-32P-201ENST00000411193 191 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 HMGB1P18-201ENST00000438801 619 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 RPL31P58-201ENST00000469001 379 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AC104564.1-201ENST00000493028 407 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AC091951.2-201ENST00000500762 203 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 AL355073.2-201ENST00000612106 557 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 PCGEM1.1-201ENST00000613431 131 ntBASIC1.59□□□□□ -2.15
NANOGQ9H9S0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.59□□□□□ -2.15
NANOGQ9H9S0 SNORA72.1-201ENST00000363485 129 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 RNU6-743P-201ENST00000364151 106 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.404-201ENST00000383978 102 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 RNU6-142P-201ENST00000384019 107 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.474-201ENST00000384341 102 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 MTCYBP2-201ENST00000407745 171 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.58□□□□□ -2.16
NANOGQ9H9S0 U8.21-201ENST00000459536 136 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC107032.1-201ENST00000485945 480 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC108210.2-201ENST00000503681 201 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC016632.1-201ENST00000503994 196 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.670-201ENST00000516255 105 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 RNU6-667P-201ENST00000517186 102 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC115990.1-201ENST00000526957 301 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.58□□□□□ -2.16
NANOGQ9H9S0 MIR4524B-201ENST00000581569 115 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC005730.3-201ENST00000583067 366 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC124303.1-201ENST00000605703 360 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AC008555.8-201ENST00000623602 2168 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 AP000560.1-201ENST00000624150 1937 ntBASIC1.58□□□□□ -2.16
NANOGQ9H9S0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC092268.1-201ENST00000342691 405 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNU6-1286P-201ENST00000383871 107 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.533-201ENST00000384596 114 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 MIR1262-201ENST00000408276 93 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNU2-63P-201ENST00000410792 194 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNU2-41P-201ENST00000410991 178 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC004866.1-201ENST00000411748 78 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC012306.1-201ENST00000423267 114 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AL591806.2-201ENST00000433122 173 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RPL23AP75-201ENST00000491601 451 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 CKS1BP2-201ENST00000497342 240 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC022447.4-201ENST00000504053 364 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC046134.1-201ENST00000514454 666 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNU6-120P-201ENST00000516077 103 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.691-201ENST00000516611 103 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RNA5SP384-201ENST00000516615 116 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 RBM11P1-201ENST00000604951 799 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AL356157.2-201ENST00000605122 111 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC005296.1-201ENST00000616145 209 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 TPTEP1-208ENST00000636884 213 ntBASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
NANOGQ9H9S0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
NANOGQ9H9S0 Y_RNA.166-201ENST00000363730 102 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 RNU6-546P-201ENST00000383991 107 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 RNU6-1013P-201ENST00000384180 107 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 U8.10-201ENST00000384260 133 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NANOGQ9H9S0 U8.13-201ENST00000390842 128 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 RNU6-1106P-201ENST00000390845 107 ntBASIC1.56□□□□□ -2.16
NANOGQ9H9S0 SNORA12.2-201ENST00000391040 156 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms