Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX25Q9H3E2 RNU6-1098P-201ENST00000516772 96 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.99□□□□□ -2.09
SNX25Q9H3E2 MIR4529-201ENST00000578110 78 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 POLR3GP2-201ENST00000588366 668 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC012493.3-201ENST00000604494 112 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC124303.1-201ENST00000605703 360 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC025754.2-201ENST00000606491 432 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.99□□□□□ -2.09
SNX25Q9H3E2 AC233981.2-201ENST00000611524 1614 ntBASIC1.99□□□□□ -2.09
SNX25Q9H3E2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 RNU1-76P-201ENST00000362903 159 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 RNU6-1159P-201ENST00000362933 107 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 Y_RNA.332-201ENST00000365271 113 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 MIR29C-201ENST00000385231 88 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 SNORA40.19-201ENST00000390846 128 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 BX510359.4-201ENST00000423750 193 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AC096920.1-201ENST00000423991 241 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 MTND1P2-201ENST00000430604 821 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 RNA5SP490-201ENST00000517141 136 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AC090517.1-201ENST00000569307 266 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AC011494.1-201ENST00000596454 237 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
SNX25Q9H3E2 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
SNX25Q9H3E2 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MIR340-201ENST00000362125 95 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 Y_RNA.99-201ENST00000363138 105 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 SNORA12.2-201ENST00000391040 156 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MTND3P8-201ENST00000412909 339 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AL358453.1-201ENST00000422522 250 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MTATP6P13-201ENST00000438531 667 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 TOMM22P6-201ENST00000465035 409 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC087477.1-201ENST00000465747 340 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 RPL23AP63-201ENST00000498752 471 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MTND5P5-201ENST00000503764 376 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC010928.2-201ENST00000588017 287 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC078899.2-201ENST00000595282 212 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AC016727.2-201ENST00000603988 621 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MIR6845-201ENST00000613182 61 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 CASC19-280ENST00000642102 1351 ntBASIC1.97□□□□□ -2.09
SNX25Q9H3E2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 Y_RNA.72-201ENST00000362894 103 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 SNORD114-6-201ENST00000364393 72 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 U8.10-201ENST00000384260 133 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 MIR487A-201ENST00000385009 80 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AL357139.1-201ENST00000407792 426 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 EIF4EP2-201ENST00000422816 654 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AL035666.1-201ENST00000446195 348 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 OR2AQ1P-201ENST00000451972 200 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 RN7SL274P-201ENST00000492268 272 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC107393.1-201ENST00000512403 346 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 Y_RNA.682-201ENST00000516457 100 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.96□□□□□ -2.1
SNX25Q9H3E2 MIR5696-201ENST00000578474 85 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.96□□□□□ -2.1
SNX25Q9H3E2 AC009487.4-201ENST00000624969 3585 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 SNORA16.1-201ENST00000364597 132 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 RNU6-596P-201ENST00000365395 98 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 SNORA18.2-201ENST00000383865 132 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 MIR549A-201ENST00000385268 96 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 FGF7P8-201ENST00000402994 292 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 MIR548K-201ENST00000408406 116 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 Z82188.1-201ENST00000436709 154 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AC245102.2-201ENST00000448956 180 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AC007215.1-201ENST00000464893 276 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 ACA59.1-201ENST00000515966 143 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AC011712.1-201ENST00000588959 234 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 RPL17P51-201ENST00000605218 238 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AL022345.1-201ENST00000607292 135 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.95□□□□□ -2.1
SNX25Q9H3E2 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.95□□□□□ -2.1
SNX25Q9H3E2 SCARNA4-201ENST00000629045 128 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms