Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC097473.1-201ENST00000508142 408 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 SNORA14.1-201ENST00000516113 141 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC016925.2-201ENST00000605108 242 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC064807.4-201ENST00000607201 407 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 PVT1_3.1-201ENST00000620853 95 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MIR6767-201ENST00000637302 66 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 ELL2P3-201ENST00000457883 1602 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 Y_RNA.1-201ENST00000352915 104 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 SNORD31B-201ENST00000364977 69 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC090960.1-201ENST00000421072 306 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AL606489.2-201ENST00000433886 234 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1037P-201ENST00000459571 107 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RPS23P5-201ENST00000495419 428 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 HMGB1P29-201ENST00000505659 499 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RNU6-1223P-201ENST00000517124 104 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MIR5094-201ENST00000578766 85 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 RPL17P51-201ENST00000605218 238 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC009994.1-201ENST00000606889 253 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 MIR3974-201ENST00000637126 96 ntBASIC1.47□□□□□ -2.17
RPAP1Q9BWH6 AC009541.1-201ENST00000438279 2662 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 RNU6-112P-201ENST00000363599 104 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 RNU6-439P-201ENST00000384188 106 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MIR208B-201ENST00000401172 77 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 TPTE2P5-203ENST00000458118 728 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MTCO3P38-201ENST00000468910 766 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 FAM206BP-201ENST00000510179 541 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 RPL39P5-202ENST00000512505 151 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 AC090517.1-201ENST00000569307 266 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MIR151B-201ENST00000584249 96 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 MIR6779-201ENST00000617283 64 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 AL136221.1-201ENST00000621449 509 ntBASIC1.46□□□□□ -2.18
RPAP1Q9BWH6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 MIR520E-201ENST00000384867 87 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC112492.4-201ENST00000456549 352 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC010424.1-201ENST00000506336 297 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC108078.1-201ENST00000508073 725 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 RNU6-323P-201ENST00000521915 107 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC006362.1-201ENST00000567392 174 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 FAM106DP-201ENST00000586416 501 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 MIR6788-201ENST00000618842 66 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.45□□□□□ -2.18
RPAP1Q9BWH6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 AP000568.1-201ENST00000282964 442 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RNU1-76P-201ENST00000362903 159 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RNU6-342P-201ENST00000384521 104 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RNU6-1093P-201ENST00000391194 107 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 CDK8P2-201ENST00000415020 547 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 MTND4LP16-201ENST00000440828 295 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 AC016925.1-201ENST00000458303 298 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RNU6-189P-201ENST00000516120 101 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 RNU6-612P-201ENST00000516909 102 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 AC017083.3-201ENST00000609955 700 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 AC009509.4-201ENST00000619202 509 ntBASIC1.44□□□□□ -2.18
RPAP1Q9BWH6 AL159152.1-201ENST00000635019 2587 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 Y_RNA.77-201ENST00000362962 107 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RNU6-82P-201ENST00000363970 107 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 Y_RNA.359-201ENST00000365498 102 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 MIR222-201ENST00000384992 110 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 Y_RNA.582-201ENST00000391023 95 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RPL21P111-201ENST00000418453 477 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC007395.1-201ENST00000451333 677 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC087477.1-201ENST00000465747 340 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 RPL31P58-201ENST00000469001 379 ntBASIC1.43□□□□□ -2.18
RPAP1Q9BWH6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms