Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MIR4753-201ENST00000585119 83 ntBASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 POLR3GP2-201ENST00000588366 668 ntBASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 AC137590.2-201ENST00000619709 240 ntBASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 AL359757.2-201ENST00000624309 274 ntBASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 AL359697.1-201ENST00000624879 587 ntBASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
NDUFAF3Q9BU61 ZNF355P-201ENST00000427301 3216 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 MIR1283-1-201ENST00000408494 87 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 SNORA11.4-201ENST00000408823 129 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AL445685.2-201ENST00000422551 342 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AL357134.1-201ENST00000445848 426 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 MTCO3P8-201ENST00000453691 755 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC007215.1-201ENST00000464893 276 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 DEFB122-202ENST00000569013 197 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC010928.2-201ENST00000588017 287 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 SNRPGP20-201ENST00000604477 205 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 AC019193.3-201ENST00000609144 554 ntBASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.59□□□□□ -2.15
NDUFAF3Q9BU61 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
NDUFAF3Q9BU61 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AL356292.1-201ENST00000283110 373 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 SNORD50.1-201ENST00000362987 71 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.89-201ENST00000363031 102 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.516-201ENST00000384541 124 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 MIR517A-201ENST00000385001 87 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 RPL21P111-201ENST00000418453 477 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AC018634.1-201ENST00000437554 401 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 HMGB1P18-201ENST00000438801 619 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 ATP5J2P3-201ENST00000451550 258 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 MTCO2P30-201ENST00000503662 364 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 SCARNA16.3-201ENST00000516595 184 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 SNORA31.17-201ENST00000516953 127 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 RRN3P3-201ENST00000549207 578 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 HSBP1P1-201ENST00000555205 166 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 SNORA59B-202ENST00000578183 701 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 U4.5-201ENST00000617137 123 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AC009033.1-201ENST00000624279 431 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 AC090617.10-201ENST00000624308 134 ntBASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.135-201ENST00000363439 95 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.212-201ENST00000364177 102 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-1215P-201ENST00000384441 102 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MIR487A-201ENST00000385009 80 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MIR221-201ENST00000385135 110 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MIR320B2-201ENST00000408479 138 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AL513185.2-201ENST00000425543 193 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 DAP3P1-201ENST00000441522 278 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC009237.7-201ENST00000447357 229 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC067942.3-201ENST00000512025 362 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 ACA59.1-201ENST00000515966 143 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-1041P-201ENST00000516254 102 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MTND1P5-201ENST00000517906 940 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AL158827.2-201ENST00000602494 330 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AL691447.3-201ENST00000635020 330 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 AC100810.6-201ENST00000638068 285 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 MTND4P5-201ENST00000435821 1374 ntBASIC1.57□□□□□ -2.16
NDUFAF3Q9BU61 ZNF204P-201ENST00000416749 2397 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-862P-201ENST00000362804 105 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-112P-201ENST00000363599 104 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.295-201ENST00000364918 102 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 SNORD116-11-201ENST00000383882 92 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 Y_RNA.453-201ENST00000384223 109 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 AC009161.1-201ENST00000417306 376 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 NFU1P2-201ENST00000448700 469 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 AC079354.2-201ENST00000453523 154 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 PPP1R2P5-201ENST00000457256 603 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 snoU13.15-201ENST00000459407 104 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 MTCYBP18-201ENST00000501056 747 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-948P-201ENST00000516374 107 ntBASIC1.56□□□□□ -2.16
NDUFAF3Q9BU61 RNU6-856P-201ENST00000516959 98 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms