Protein–RNA interactions for Protein: Q9BQ90

KLHDC3, Kelch domain-containing protein 3, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3Q9BQ90 MTND1P5-201ENST00000517906 940 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC016957.1-201ENST00000534895 309 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 TPRKBP2-201ENST00000565969 475 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC024614.2-201ENST00000577584 372 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 U4.5-201ENST00000617137 123 ntBASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
KLHDC3Q9BQ90 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MIR340-201ENST00000362125 95 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-562P-201ENST00000362731 107 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 RNU1-17P-201ENST00000363022 152 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 RNY4P14-201ENST00000363656 96 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-373P-201ENST00000411247 98 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 ZNF885P-201ENST00000420174 1098 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AL589823.1-201ENST00000429577 183 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MTCO3P18-201ENST00000440206 761 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC007395.1-201ENST00000451333 677 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 SNORA25.15-201ENST00000516487 89 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MTND1P35-201ENST00000526739 508 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AC026470.2-201ENST00000561492 181 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MIR3683-201ENST00000580847 82 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MIR7843-201ENST00000622274 79 ntBASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.48□□□□□ -2.17
KLHDC3Q9BQ90 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 SNORA18.2-201ENST00000383865 132 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 SNORA12.2-201ENST00000391040 156 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 RN7SKP101-201ENST00000411376 320 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AC139712.2-201ENST00000424302 339 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 RNU7-187P-201ENST00000458985 68 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 RNA5SP57-201ENST00000459463 123 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AC130509.1-201ENST00000464158 433 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 FAM206BP-201ENST00000510179 541 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 SNORA44.1-201ENST00000517031 108 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 MRPS36P4-201ENST00000534436 298 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 RMST_3.1-201ENST00000611651 109 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AC005562.2-201ENST00000618264 111 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AC137590.2-201ENST00000619709 240 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AL359697.1-201ENST00000624879 587 ntBASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.47□□□□□ -2.17
KLHDC3Q9BQ90 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.46□□□□□ -2.17
KLHDC3Q9BQ90 Y_RNA.3-201ENST00000362331 103 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 Y_RNA.414-201ENST00000384011 101 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 RNU6-332P-201ENST00000391193 108 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 DAP3P1-201ENST00000441522 278 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 OR2AQ1P-201ENST00000451972 200 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 RNVU1-2-201ENST00000516326 135 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 RNU6-256P-201ENST00000516747 97 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 DEFB131C-201ENST00000528817 165 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AL138726.1-201ENST00000614873 333 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 AC024614.3-201ENST00000637860 256 ntBASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.46□□□□□ -2.18
KLHDC3Q9BQ90 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 AC006026.1-201ENST00000444025 1803 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 MTND5P9-201ENST00000503854 1755 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 RNU6-1252P-201ENST00000363054 104 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 Y_RNA.135-201ENST00000363439 95 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 RNA5SP99-201ENST00000364020 114 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 Y_RNA.450-201ENST00000384198 113 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 RNU6-790P-201ENST00000384479 105 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 Y_RNA.554-201ENST00000384672 102 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 RNU6-95P-201ENST00000384697 107 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 Y_RNA.573-201ENST00000384763 105 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 MIR300-201ENST00000401138 83 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 RNA5SP118-201ENST00000410385 109 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 AF186996.7-201ENST00000492781 209 ntBASIC1.45□□□□□ -2.18
KLHDC3Q9BQ90 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms