Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 SNORA22B-201ENST00000383876 138 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNU6-692P-201ENST00000384496 107 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNU2-23P-201ENST00000410545 195 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AP000275.1-201ENST00000411943 390 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 EIF4EP2-201ENST00000422816 654 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP2Q99959 RPL23AP50-201ENST00000434149 455 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP2Q99959 snoU13.23-201ENST00000458863 104 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC108210.2-201ENST00000503681 201 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 RNA5SP137-201ENST00000516833 135 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.17□□□□□ -2.06
PKP2Q99959 AC007229.1-201ENST00000590455 412 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC078899.2-201ENST00000595282 212 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AP001836.1-201ENST00000604675 523 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC025754.2-201ENST00000606491 432 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC005014.2-201ENST00000607795 599 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 AC007792.1-201ENST00000623023 402 ntBASIC2.17□□□□□ -2.06
PKP2Q99959 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PKP2Q99959 RNU6-212P-201ENST00000362642 104 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 SNORD56.1-201ENST00000362913 68 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 SNORD50.1-201ENST00000362987 71 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 RNU1-23P-201ENST00000363361 144 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 Y_RNA.202-201ENST00000364083 110 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 Y_RNA.252-201ENST00000364556 101 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 SNORA33.2-201ENST00000365413 134 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 Y_RNA.496-201ENST00000384444 101 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 Y_RNA.533-201ENST00000384596 114 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PKP2Q99959 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC007969.2-201ENST00000441891 191 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 IPO7P1-201ENST00000442031 636 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AL035666.1-201ENST00000446195 348 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC026436.1-201ENST00000510537 270 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP2Q99959 RNU6-699P-201ENST00000517081 110 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP2Q99959 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP2Q99959 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP2Q99959 DEFB122-202ENST00000569013 197 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 MIR4529-201ENST00000578110 78 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 MIR5696-201ENST00000578474 85 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AL031274.2-201ENST00000599419 203 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.16□□□□□ -2.06
PKP2Q99959 AC009318.2-201ENST00000610917 651 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC022202.1-201ENST00000613515 211 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 AC091925.1-201ENST00000623204 462 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 MIR1291-201ENST00000627649 87 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.16□□□□□ -2.06
PKP2Q99959 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.16□□□□□ -2.06
PKP2Q99959 AC016717.2-201ENST00000609089 5141 ntBASIC2.16□□□□□ -2.06
PKP2Q99959 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PKP2Q99959 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
PKP2Q99959 RNU6-1210P-201ENST00000363775 107 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RNA5SP68-201ENST00000363885 119 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 SNORA16B-201ENST00000364674 135 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RNU6-784P-201ENST00000384330 106 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 snosnR66.1-201ENST00000391095 99 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 SNORA3.2-201ENST00000408221 125 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.15□□□□□ -2.07
PKP2Q99959 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.15□□□□□ -2.07
PKP2Q99959 AL353997.1-201ENST00000432936 108 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC079354.2-201ENST00000453523 154 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RNU6-717P-201ENST00000459076 104 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC055731.1-201ENST00000474387 401 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AL121594.1-201ENST00000475906 575 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC018868.1-201ENST00000491307 315 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.15□□□□□ -2.07
PKP2Q99959 RPS29P21-201ENST00000496272 170 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RNU6-548P-201ENST00000517083 115 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RN7SKP295-201ENST00000517264 153 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 RNU2-19P-201ENST00000517288 84 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC034114.1-201ENST00000520293 285 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 SUB1P3-201ENST00000564581 315 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC026271.5-201ENST00000577873 130 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.15□□□□□ -2.07
PKP2Q99959 AC005034.5-201ENST00000604219 466 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 AC040896.1-201ENST00000613819 479 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.15□□□□□ -2.07
PKP2Q99959 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.15□□□□□ -2.07
PKP2Q99959 ZNF658B-202ENST00000615961 3375 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
PKP2Q99959 MTND5P9-201ENST00000503854 1755 ntBASIC2.15□□□□□ -2.07
PKP2Q99959 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
PKP2Q99959 AC002543.1-201ENST00000299783 1954 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PKP2Q99959 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PKP2Q99959 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 RNY1P16-201ENST00000363063 111 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 Y_RNA.123-201ENST00000363338 102 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 Y_RNA.148-201ENST00000363557 117 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 Y_RNA.162-201ENST00000363683 102 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 SNORD32A-201ENST00000364805 84 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 BTF3L4P2-201ENST00000392798 346 ntBASIC2.14□□□□□ -2.07
PKP2Q99959 RNU6-1245P-201ENST00000411130 106 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms