Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RNU6-21P-201ENST00000384710 107 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 U6atac.2-201ENST00000408644 118 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 MIR548H3-201ENST00000408771 118 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 Y_RNA.597-201ENST00000410463 100 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 AL390729.2-201ENST00000416137 156 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.98□□□□□ -2.09
LITAFQ99732 AC245028.1-201ENST00000423259 256 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 RAB28P5-201ENST00000427490 651 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 TPT1P12-201ENST00000448968 492 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC1.98□□□□□ -2.09
LITAFQ99732 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 SCARNA24.2-201ENST00000516968 130 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.98□□□□□ -2.09
LITAFQ99732 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.98□□□□□ -2.09
LITAFQ99732 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 AL713866.2-201ENST00000603579 219 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 AC010900.2-201ENST00000604508 210 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 SNORD11B-201ENST00000607707 90 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 MIR7157-201ENST00000635801 60 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
LITAFQ99732 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.98□□□□□ -2.09
LITAFQ99732 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LITAFQ99732 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LITAFQ99732 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
LITAFQ99732 AC110774.1-201ENST00000623567 2018 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AC068538.1-201ENST00000376856 336 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 SNORD21-201ENST00000383953 95 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 RNU6-1274P-201ENST00000384557 107 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 Y_RNA.552-201ENST00000384665 112 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 MIR592-201ENST00000384959 97 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
LITAFQ99732 RNA5SP504-201ENST00000410676 117 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.97□□□□□ -2.09
LITAFQ99732 RN7SL610P-201ENST00000463845 291 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 HMGB3P17-201ENST00000504195 649 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 SERF1AP1-201ENST00000514575 187 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AP002001.1-203ENST00000534002 267 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.97□□□□□ -2.09
LITAFQ99732 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LITAFQ99732 AC006130.2-201ENST00000586202 326 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 RPL17P51-201ENST00000605218 238 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AC022441.3-201ENST00000605737 136 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
LITAFQ99732 AC004467.1-201ENST00000615678 330 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AC006133.1-201ENST00000617106 264 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 RNA5SP196-201ENST00000625967 102 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 AC068205.3-201ENST00000636385 468 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
LITAFQ99732 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LITAFQ99732 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LITAFQ99732 Z83843.1-201ENST00000604070 3685 ntBASIC1.97□□□□□ -2.09
LITAFQ99732 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
LITAFQ99732 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LITAFQ99732 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LITAFQ99732 AC080128.1-201ENST00000474389 1917 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 Y_RNA.20-201ENST00000362479 113 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 Y_RNA.101-201ENST00000363154 102 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 SNORD27-201ENST00000363981 72 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 RNU6-944P-201ENST00000364023 107 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 SNORD87-201ENST00000364849 89 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 SNORA72.2-201ENST00000365028 127 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 Y_RNA.331-201ENST00000365267 102 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 Y_RNA.352-201ENST00000365439 102 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 SNORA67.2-201ENST00000384300 149 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 SNORD67-201ENST00000390833 111 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LITAFQ99732 AL603910.2-201ENST00000407268 136 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 MIR1289-1-201ENST00000408836 144 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 RPL23AP36-201ENST00000413895 458 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.96□□□□□ -2.1
LITAFQ99732 YME1L1P1-201ENST00000429435 297 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.96□□□□□ -2.1
LITAFQ99732 RPS29P7-201ENST00000439662 171 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 RPL23AP3-201ENST00000453844 468 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 RNU1-117P-201ENST00000517041 158 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.96□□□□□ -2.1
LITAFQ99732 MIR4284-201ENST00000578924 81 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 MIR4286-201ENST00000580651 93 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC105245.1-201ENST00000581934 244 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC008749.1-201ENST00000597650 306 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC141273.2-201ENST00000618989 130 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 AC091932.3-201ENST00000624223 323 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LITAFQ99732 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
LITAFQ99732 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
LITAFQ99732 MAPK10-266ENST00000641066 6555 ntBASIC1.96□□□□□ -2.1
LITAFQ99732 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.96□□□□□ -2.1
LITAFQ99732 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 AL161431.1-201ENST00000618966 4205 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.95□□□□□ -2.1
LITAFQ99732 MIR410-201ENST00000362222 80 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNORA58B-201ENST00000364259 136 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-326P-201ENST00000365480 107 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-1310P-201ENST00000384153 107 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 Y_RNA.446-201ENST00000384178 104 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNORA7.4-201ENST00000384249 137 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 RNU6-1026P-201ENST00000384465 108 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 Y_RNA.539-201ENST00000384635 107 ntBASIC1.95□□□□□ -2.1
LITAFQ99732 SNORD15B-201ENST00000384714 146 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms