Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RN7SKP43-201ENST00000516173 320 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 RNA5SP54-201ENST00000516951 92 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 RN7SKP40-201ENST00000517211 242 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.8□□□□□ -1.96
TIMP4Q99727 AP000867.2-201ENST00000532468 320 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC105137.2-201ENST00000569073 466 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 MIR4423-201ENST00000580922 80 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC005176.2-201ENST00000596933 147 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 MZT1P2-201ENST00000604387 248 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC006111.3-201ENST00000622137 383 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 AC127459.3-201ENST00000624328 466 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 SNORD98-201ENST00000636377 67 ntBASIC2.8□□□□□ -1.96
TIMP4Q99727 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
TIMP4Q99727 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TIMP4Q99727 MIR411-201ENST00000362239 96 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RNU6-774P-201ENST00000363238 107 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 SNORD115-8-201ENST00000363856 82 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 Y_RNA.180-201ENST00000363867 113 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 SNORA71.1-201ENST00000364523 117 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 SNORD115-38-201ENST00000365037 82 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 Y_RNA.331-201ENST00000365267 102 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 Y_RNA.418-201ENST00000384029 102 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RNU6-886P-201ENST00000384319 105 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RNU6-19P-201ENST00000384718 107 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 Y_RNA.570-201ENST00000384750 101 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 MIR208B-201ENST00000401172 77 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RNA5SP38-201ENST00000410750 119 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
TIMP4Q99727 PTGES3P4-201ENST00000426243 356 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 MRPS10P1-201ENST00000448483 130 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC010099.1-201ENST00000455434 375 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC006483.1-201ENST00000487308 313 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.79□□□□□ -1.96
TIMP4Q99727 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.79□□□□□ -1.96
TIMP4Q99727 SNORD116-28-201ENST00000516123 91 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 Y_RNA.679-201ENST00000516416 91 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RPL21P9-201ENST00000556149 474 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.79□□□□□ -1.96
TIMP4Q99727 AL162424.1-201ENST00000602325 221 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 AC004832.5-201ENST00000608677 401 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.79□□□□□ -1.96
TIMP4Q99727 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
TIMP4Q99727 MTND5P35-201ENST00000557537 1720 ntBASIC2.79□□□□□ -1.96
TIMP4Q99727 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
TIMP4Q99727 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.96
TIMP4Q99727 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TIMP4Q99727 RNU6-529P-201ENST00000363383 104 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 RNU6-727P-201ENST00000363592 107 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.179-201ENST00000363844 90 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.292-201ENST00000364904 97 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 SNORA72.2-201ENST00000365028 127 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.446-201ENST00000384178 104 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 RNU6-198P-201ENST00000384258 104 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.498-201ENST00000384460 102 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.590-201ENST00000410140 107 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.626-201ENST00000411288 95 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.78□□□□□ -1.96
TIMP4Q99727 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.78□□□□□ -1.96
TIMP4Q99727 POLR2KP2-201ENST00000438155 177 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 AC104332.1-201ENST00000440471 797 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 UQCRBP2-201ENST00000447827 297 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.78□□□□□ -1.96
TIMP4Q99727 AIG1P1-201ENST00000503376 148 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.78□□□□□ -1.96
TIMP4Q99727 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.78□□□□□ -1.96
TIMP4Q99727 Y_RNA.683-201ENST00000516508 93 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 AP002392.1-201ENST00000537692 208 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 AC055872.1-201ENST00000570978 278 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 AC091152.3-201ENST00000604227 325 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.78□□□□□ -1.96
TIMP4Q99727 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
TIMP4Q99727 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TIMP4Q99727 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.78□□□□□ -1.96
TIMP4Q99727 AC002543.1-201ENST00000299783 1954 ntBASIC2.78□□□□□ -1.97
TIMP4Q99727 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
TIMP4Q99727 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TIMP4Q99727 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TIMP4Q99727 MIR22-201ENST00000362190 85 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 Y_RNA.230-201ENST00000364348 109 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RNU6-487P-201ENST00000365430 104 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 Y_RNA.383-201ENST00000383855 97 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 SNORA26.3-201ENST00000391119 136 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 U3.26-201ENST00000391236 204 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 AL512633.1-201ENST00000399931 655 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RPL19P1-201ENST00000411635 428 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RPL23AP36-201ENST00000413895 458 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 AL390729.2-201ENST00000416137 156 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 AC244505.4-201ENST00000434905 287 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RPS29P6-201ENST00000438196 145 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 AL714022.1-201ENST00000439897 151 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 SSXP5-201ENST00000443473 287 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.77□□□□□ -1.97
TIMP4Q99727 RNU6-625P-201ENST00000459412 107 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RN7SL20P-201ENST00000488827 297 ntBASIC2.77□□□□□ -1.97
TIMP4Q99727 RNU5F-2P-201ENST00000516066 82 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms