Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 RPS20P10-201ENST00000451209 253 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNU7-90P-201ENST00000459216 62 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC104982.1-201ENST00000478775 574 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC002350.1-201ENST00000490759 375 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC117522.1-201ENST00000509821 380 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC091874.1-201ENST00000511402 339 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 SNORA31.10-201ENST00000516482 106 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 RNU6-1069P-201ENST00000516612 133 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC109479.2-201ENST00000517842 174 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.26□□□□□ -2.37
LYSMD1Q96S90 ZNF519P3-201ENST00000557158 1032 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.26□□□□□ -2.37
LYSMD1Q96S90 MIR4778-201ENST00000577635 80 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC011712.1-201ENST00000588959 234 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.26□□□□□ -2.37
LYSMD1Q96S90 AC004808.1-201ENST00000627671 721 ntBASIC0.26□□□□□ -2.37
LYSMD1Q96S90 CASC19-280ENST00000642102 1351 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC092268.1-201ENST00000342691 405 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 U3.4-201ENST00000363352 213 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 SNORD32A-201ENST00000364805 84 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 RNU6-116P-201ENST00000384042 109 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 MTCYBP36-201ENST00000404146 440 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 MIR1253-201ENST00000408273 105 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC090960.1-201ENST00000421072 306 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 RNU7-21P-201ENST00000459430 62 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC112206.4-201ENST00000515142 405 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC010376.1-201ENST00000522101 334 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC024995.1-201ENST00000523014 93 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 Z99497.2-201ENST00000603634 310 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AC064872.1-201ENST00000604823 1072 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 AL592221.1-201ENST00000605266 382 ntBASIC0.25□□□□□ -2.37
LYSMD1Q96S90 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.25□□□□□ -2.37
LYSMD1Q96S90 RNU4-76P-201ENST00000364509 141 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 RNU6-1303P-201ENST00000364841 107 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 Y_RNA.324-201ENST00000365165 102 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 RNU6-61P-201ENST00000365528 109 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MIR549A-201ENST00000385268 96 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 SNORD41-201ENST00000386967 70 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MIR1283-1-201ENST00000408494 87 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 RNU6-757P-201ENST00000410334 100 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MTATP6P20-201ENST00000414147 562 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MTND4LP16-201ENST00000440828 295 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AL031313.1-201ENST00000448435 256 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC016632.1-201ENST00000503994 196 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 HMGB1P29-201ENST00000505659 499 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC025465.4-201ENST00000513422 638 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 RNA5SP134-201ENST00000516492 96 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 MTND4LP18-201ENST00000526864 291 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.24□□□□□ -2.37
LYSMD1Q96S90 BNIP3P40-201ENST00000596017 556 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC013244.3-201ENST00000605614 388 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC097065.2-201ENST00000608159 533 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AL360219.1-201ENST00000610230 366 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AP000484.1-201ENST00000620067 1252 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 AC244015.1-201ENST00000622301 99 ntBASIC0.24□□□□□ -2.37
LYSMD1Q96S90 Y_RNA.97-201ENST00000363094 102 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 RNU6-45P-201ENST00000384471 107 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 SNORA26.3-201ENST00000391119 136 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 SNORA75.2-201ENST00000391138 150 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 RNU6-1093P-201ENST00000391194 107 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 SNORA75.3-201ENST00000391231 150 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 SNORD99-201ENST00000408612 74 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 RN7SKP200-201ENST00000410564 320 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 ELOCP4-201ENST00000420090 333 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.23□□□□□ -2.37
LYSMD1Q96S90 RPS24P1-201ENST00000438550 371 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AL031274.1-201ENST00000450334 232 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AC010587.1-201ENST00000505809 469 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.23□□□□□ -2.37
LYSMD1Q96S90 RNU6-1146P-201ENST00000516282 102 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 DEFB131C-201ENST00000528817 165 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AC112187.2-201ENST00000604345 283 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 Z99289.3-201ENST00000605586 594 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AC009994.1-201ENST00000606889 253 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AC008250.2-201ENST00000615261 205 ntBASIC0.23□□□□□ -2.37
LYSMD1Q96S90 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.23□□□□□ -2.37
LYSMD1Q96S90 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.23□□□□□ -2.37
LYSMD1Q96S90 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 Y_RNA.287-201ENST00000364853 94 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 MIR300-201ENST00000401138 83 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC0.22□□□□□ -2.37
LYSMD1Q96S90 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AC137499.1-201ENST00000427602 88 ntBASIC0.22□□□□□ -2.37
LYSMD1Q96S90 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms