Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.74□□□□□ -2.13
RAB40CQ96S21 IGHVIII-44-202ENST00000636235 289 ntBASIC1.74□□□□□ -2.13
RAB40CQ96S21 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.74□□□□□ -2.13
RAB40CQ96S21 Y_RNA.160-201ENST00000363677 92 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNU6-1059P-201ENST00000363752 98 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNA5SP493-201ENST00000364115 91 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNU6-596P-201ENST00000365395 98 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
RAB40CQ96S21 U8.10-201ENST00000384260 133 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 MIR32-201ENST00000384965 70 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 MIR487A-201ENST00000385009 80 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNU6-876P-201ENST00000391295 104 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
RAB40CQ96S21 SNORA11.2-201ENST00000408318 127 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 MIR548F5-201ENST00000408421 86 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNA5SP508-201ENST00000411327 119 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 AC139712.2-201ENST00000424302 339 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 USP9YP30-201ENST00000430729 455 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 Z82188.1-201ENST00000436709 154 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 AC007215.1-201ENST00000464893 276 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 RNA5SP364-201ENST00000516938 78 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 MIR3935-201ENST00000583472 104 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 AC010928.2-201ENST00000588017 287 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 SNRPGP20-201ENST00000604477 205 ntBASIC1.73□□□□□ -2.13
RAB40CQ96S21 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.73□□□□□ -2.13
RAB40CQ96S21 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAB40CQ96S21 SNORD115-32-201ENST00000364079 82 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 RNA5SP160-201ENST00000364866 120 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 RNU6-767P-201ENST00000384132 107 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 Y_RNA.533-201ENST00000384596 114 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 MIR221-201ENST00000385135 110 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 MIR320B2-201ENST00000408479 138 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 RNU6-174P-201ENST00000410406 106 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 RNA5SP501-201ENST00000410990 112 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 MTCO3P8-201ENST00000453691 755 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 RNA5SP57-201ENST00000459463 123 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 AC046134.1-201ENST00000514454 666 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 AC022254.1-201ENST00000567857 235 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 AC005668.1-201ENST00000571142 476 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 MIR3169-201ENST00000578032 83 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 MIR5696-201ENST00000578474 85 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 AC005858.4-201ENST00000623191 700 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 ZNF204P-201ENST00000416749 2397 ntBASIC1.72□□□□□ -2.13
RAB40CQ96S21 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
RAB40CQ96S21 MIR340-201ENST00000362125 95 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RNU6-545P-201ENST00000362681 104 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 Y_RNA.132-201ENST00000363421 102 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RAB40CQ96S21 MIR300-201ENST00000401138 83 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 MIR548K-201ENST00000408406 116 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RNU2-40P-201ENST00000410833 196 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC074085.1-201ENST00000413598 418 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC009310.1-201ENST00000414414 451 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC243428.1-201ENST00000421099 264 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RPS3AP52-201ENST00000435639 297 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC009237.7-201ENST00000447357 229 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC107399.1-201ENST00000451226 265 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC007395.1-201ENST00000451333 677 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 SNORD5.1-201ENST00000458800 75 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RNU1-131P-201ENST00000458943 161 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 snoU13.30-201ENST00000458951 104 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RPL31P58-201ENST00000469001 379 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB40CQ96S21 RNU6-1016P-201ENST00000516689 94 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 RNU7-30P-201ENST00000516835 62 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.71□□□□□ -2.14
RAB40CQ96S21 MIR4672-201ENST00000583126 81 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 7SK.7-201ENST00000603504 247 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40CQ96S21 AC098657.3-201ENST00000620434 263 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.71□□□□□ -2.14
RAB40CQ96S21 BX322639.1-202ENST00000423987 2213 ntBASIC1.71□□□□□ -2.14
RAB40CQ96S21 Y_RNA.279-201ENST00000364763 95 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 RNU6-842P-201ENST00000384269 107 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 MIR153-2-201ENST00000385225 87 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 MT-TL1-201ENST00000386347 75 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 SNORA48.1-201ENST00000390879 135 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 MIR1283-1-201ENST00000408494 87 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 RN7SKP32-201ENST00000410167 303 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC004866.1-201ENST00000411748 78 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC010531.2-201ENST00000465012 153 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.7□□□□□ -2.14
RAB40CQ96S21 RNA5SP281-201ENST00000516504 135 ntBASIC1.7□□□□□ -2.14
RAB40CQ96S21 SCARNA16.3-201ENST00000516595 184 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms