Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 MTND3P22-201ENST00000510932 243 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 AC005741.1-201ENST00000511094 432 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 SNORA31.16-201ENST00000516773 139 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 RNA5SP137-201ENST00000516833 135 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 MRPS36P4-201ENST00000534436 298 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 MIR5694-201ENST00000581190 76 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 MIR3136-201ENST00000583498 78 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 snoU13.31-201ENST00000607291 104 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 MIR6840-201ENST00000611937 71 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.804-201ENST00000615262 101 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 AC063943.3-201ENST00000615562 356 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 WWP1P1-201ENST00000466609 2769 ntBASIC2.13□□□□□ -2.07
NECTIN4Q96NY8 RNU6-1286P-201ENST00000383871 107 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.387-201ENST00000383918 102 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 RNU6-142P-201ENST00000384019 107 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AC022028.1-201ENST00000412054 408 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 EIF1AXP1-201ENST00000419267 435 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AC108667.1-201ENST00000428618 249 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 ACA59.1-201ENST00000515966 143 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 RNU6-586P-201ENST00000517265 104 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 APOOP3-201ENST00000536787 586 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AC093249.1-201ENST00000567049 203 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AL355375.2-201ENST00000574825 175 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AC026271.5-201ENST00000577873 130 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AL359697.1-201ENST00000624879 587 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 SNORD98-201ENST00000636377 67 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 AP000553.5-201ENST00000641933 54 ntBASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
NECTIN4Q96NY8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 KPNA2P1-201ENST00000458289 1591 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 RNU4-15P-201ENST00000362613 141 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 RNU6-1188P-201ENST00000363795 107 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 U3.13-201ENST00000364804 214 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 SNORA25B-201ENST00000365507 128 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.404-201ENST00000383978 102 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 SNORA29-201ENST00000384183 140 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 SNORA36A-201ENST00000384221 132 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.473-201ENST00000384333 102 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.504-201ENST00000384481 104 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 MT-TD-201ENST00000387419 68 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 SNORA40.18-201ENST00000391200 128 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC107032.1-201ENST00000485945 480 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.708-201ENST00000516950 96 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 GNAI2P1-201ENST00000541815 315 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC021231.3-201ENST00000558497 370 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC110588.1-201ENST00000559699 137 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AL034555.1-201ENST00000604816 211 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AL670379.2-201ENST00000604983 252 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.783-201ENST00000613546 102 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 MIR1302-1-201ENST00000637932 143 ntBASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NECTIN4Q96NY8 RNU4-73P-201ENST00000363164 141 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 Y_RNA.356-201ENST00000365475 113 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 SNORD116-29-201ENST00000384516 83 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 SNORA75.4-201ENST00000391278 119 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 MTCYBP2-201ENST00000407745 171 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 RNA5SP201-201ENST00000410316 124 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC243428.1-201ENST00000421099 264 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AL590135.1-201ENST00000422215 156 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AL445685.2-201ENST00000422551 342 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC019205.3-201ENST00000424573 156 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 Z82205.1-201ENST00000428456 297 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC016700.2-201ENST00000446011 156 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 SNRPGP7-201ENST00000469016 106 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC015911.1-201ENST00000495111 156 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 RNU2-19P-201ENST00000517288 84 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC093027.1-201ENST00000546698 429 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 FRG2DP-202ENST00000566967 323 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 MIR4781-201ENST00000585250 76 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 Z98751.3-201ENST00000604447 521 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC009229.3-201ENST00000608056 282 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC005520.5-201ENST00000613926 164 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC104985.2-201ENST00000620598 500 ntBASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NECTIN4Q96NY8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms