Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.34□□□□□ -2.36
ALPK3Q96L96 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.34□□□□□ -2.36
ALPK3Q96L96 AC022432.1-201ENST00000595739 310 ntBASIC0.34□□□□□ -2.36
ALPK3Q96L96 AC105148.1-201ENST00000604961 409 ntBASIC0.34□□□□□ -2.36
ALPK3Q96L96 CTHRC1P1-201ENST00000605383 469 ntBASIC0.34□□□□□ -2.36
ALPK3Q96L96 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC0.34□□□□□ -2.36
ALPK3Q96L96 SNORD3E-202ENST00000627253 216 ntBASIC0.34□□□□□ -2.36
ALPK3Q96L96 RNU6-769P-201ENST00000384407 104 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 RNU6-1257P-201ENST00000384625 110 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 MTATP6P20-201ENST00000414147 562 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.33□□□□□ -2.36
ALPK3Q96L96 RPS24P1-201ENST00000438550 371 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 MTCO3P18-201ENST00000440206 761 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AL360271.2-201ENST00000447710 161 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC0.33□□□□□ -2.36
ALPK3Q96L96 SNRPGP7-201ENST00000469016 106 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 MTCO3P7-201ENST00000510008 774 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AC104136.1-201ENST00000512969 394 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 RNU6-1041P-201ENST00000516254 102 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 PCMTD1P2-201ENST00000565017 355 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AC015688.6-201ENST00000577737 104 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AL162424.1-201ENST00000602325 221 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AC013244.3-201ENST00000605614 388 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AC009994.1-201ENST00000606889 253 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 AL158211.2-201ENST00000607282 395 ntBASIC0.33□□□□□ -2.36
ALPK3Q96L96 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
ALPK3Q96L96 RNU6-545P-201ENST00000362681 104 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU6-428P-201ENST00000362942 107 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 MIR548B-201ENST00000385247 97 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU6-387P-201ENST00000411331 105 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU7-90P-201ENST00000459216 62 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU7-94P-201ENST00000459576 63 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 PDCD5P2-201ENST00000507570 312 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC116347.2-201ENST00000514912 523 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC112206.4-201ENST00000515142 405 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU4-57P-201ENST00000515980 135 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU4-54P-201ENST00000516428 129 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
ALPK3Q96L96 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC008521.1-201ENST00000587471 187 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 SNRPGP20-201ENST00000604477 205 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC009509.4-201ENST00000619202 509 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 SNORD56.2-201ENST00000363242 71 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU6-534P-201ENST00000364877 106 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU6-692P-201ENST00000384496 107 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC010154.1-201ENST00000425857 269 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 SNORA19.3-201ENST00000516165 130 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU6-947P-201ENST00000516264 106 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 RNU4-77P-201ENST00000516692 156 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC109810.1-201ENST00000534066 224 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC008250.2-201ENST00000615261 205 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AL031667.3-201ENST00000620124 655 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 AC013437.2-201ENST00000639587 677 ntBASIC0.32□□□□□ -2.36
ALPK3Q96L96 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.32□□□□□ -2.36
ALPK3Q96L96 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
ALPK3Q96L96 RNU6-1106P-201ENST00000390845 107 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.31□□□□□ -2.36
ALPK3Q96L96 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.31□□□□□ -2.36
ALPK3Q96L96 RPL39P39-201ENST00000455840 151 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 AC104692.1-201ENST00000472406 90 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 RNU6-197P-201ENST00000516680 100 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 MIR4307-201ENST00000582802 84 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 AC005771.1-201ENST00000585581 349 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.31□□□□□ -2.36
ALPK3Q96L96 AC110760.3-201ENST00000598794 467 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 AC078795.3-201ENST00000602913 472 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 MTND3P19-201ENST00000603825 345 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 AL357312.1-201ENST00000603879 298 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 Z99289.3-201ENST00000605586 594 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.31□□□□□ -2.36
ALPK3Q96L96 MIR8054-201ENST00000620877 86 ntBASIC0.31□□□□□ -2.36
ALPK3Q96L96 RNU4-12P-201ENST00000365233 139 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
ALPK3Q96L96 MIR605-201ENST00000385078 83 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 MIR653-201ENST00000385279 96 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RNU1-119P-201ENST00000391122 165 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 MRPL42P2-201ENST00000403169 426 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC011233.1-201ENST00000422812 283 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL133396.1-201ENST00000432048 687 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 SNAP23P1-201ENST00000433229 246 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RPL22P17-201ENST00000438729 315 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 USP9YP25-201ENST00000457708 443 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC016632.1-201ENST00000503994 196 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.3□□□□□ -2.36
ALPK3Q96L96 RNU1-142P-201ENST00000516682 145 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AC023050.3-201ENST00000541142 333 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 AL451064.1-201ENST00000607718 471 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 SNORD32A-201ENST00000364805 84 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 SNORA4.2-201ENST00000365313 147 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RNU6-116P-201ENST00000384042 109 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RNU6-1026P-201ENST00000384465 108 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 SNORD89-201ENST00000390981 114 ntBASIC0.3□□□□□ -2.36
ALPK3Q96L96 RPS29P13-201ENST00000402041 169 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms