Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 HMGB1P33-201ENST00000563485 527 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AC008088.1-201ENST00000580993 280 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 AC073648.5-201ENST00000603502 305 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PKNOX2Q96KN3 RNU6-562P-201ENST00000362731 107 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 RNU6-862P-201ENST00000362804 105 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 RNU6-227P-201ENST00000362865 103 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 ARL5AP1-201ENST00000418991 388 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC245047.4-201ENST00000433189 144 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 HSPE1P9-201ENST00000440046 311 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 RPS29P27-201ENST00000463711 170 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 HMGB1P29-201ENST00000505659 499 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 RNU6-323P-201ENST00000521915 107 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC007834.2-201ENST00000536310 343 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC025811.1-201ENST00000604312 472 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC007684.1-201ENST00000609671 477 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 AC010615.1-201ENST00000594254 1764 ntBASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
PKNOX2Q96KN3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 HSBP1P2-201ENST00000299671 229 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RNU6-82P-201ENST00000363970 107 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 SNORA18.2-201ENST00000383865 132 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 SNORD116-8-201ENST00000384365 95 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AL606489.2-201ENST00000433886 234 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 TPTE2P5-203ENST00000458118 728 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 MTCO3P38-201ENST00000468910 766 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RPS3AP17-201ENST00000472594 777 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AC079140.3-201ENST00000511111 550 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AC067942.3-201ENST00000512025 362 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AC025465.4-201ENST00000513422 638 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RN7SKP298-201ENST00000515950 94 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RNU6-189P-201ENST00000516120 101 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RNU6-856P-201ENST00000516959 98 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 RNA5SP437-201ENST00000517249 129 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 DEFB131C-201ENST00000528817 165 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 AC103705.1-201ENST00000619013 241 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 Z69908.1-201ENST00000622603 247 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.24□□□□□ -2.21
PKNOX2Q96KN3 Y_RNA.1-201ENST00000352915 104 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 RNU6-545P-201ENST00000362681 104 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 Y_RNA.381-201ENST00000365666 102 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 RNU6-877P-201ENST00000383868 107 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 SNORA40.6-201ENST00000391153 128 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 MIR300-201ENST00000401138 83 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AC090960.1-201ENST00000421072 306 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 snoU13.6-201ENST00000458785 104 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 snoU13.30-201ENST00000458951 104 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 HMGN2P9-201ENST00000476875 229 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 SNORA40.12-201ENST00000516329 111 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AC087854.1-201ENST00000519706 414 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 CENPUP1-201ENST00000526649 1202 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 OSBPL9P5-201ENST00000542581 171 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 SNORA59B-202ENST00000578183 701 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AP005136.1-201ENST00000579765 429 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 Z99497.2-201ENST00000603634 310 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AC064836.2-201ENST00000609491 462 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AL021879.1-201ENST00000611756 288 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 AC078883.4-201ENST00000623218 367 ntBASIC1.23□□□□□ -2.21
PKNOX2Q96KN3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU1-96P-201ENST00000364163 162 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 SNORA63D-201ENST00000364359 132 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 Y_RNA.296-201ENST00000364930 108 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 AL117342.1-201ENST00000404861 406 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU2-7P-201ENST00000410794 178 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 AL591806.2-201ENST00000433122 173 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 AC108210.2-201ENST00000503681 201 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU6-1041P-201ENST00000516254 102 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 AC084364.2-201ENST00000546924 395 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 MIR4303-201ENST00000581299 66 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.22□□□□□ -2.21
PKNOX2Q96KN3 RNU6-418P-201ENST00000384035 107 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 MIR146A-201ENST00000385201 99 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 MIR1283-1-201ENST00000408494 87 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 RPS26P42-201ENST00000413485 326 ntBASIC1.21□□□□□ -2.22
PKNOX2Q96KN3 AC060773.1-201ENST00000421698 310 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms