Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 RNU6-1286P-201ENST00000383871 107 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AC027124.2-201ENST00000428249 105 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 RN7SKP210-201ENST00000459176 261 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AC108729.3-201ENST00000513484 108 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 RNU6-864P-201ENST00000516256 108 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 RNU6-256P-201ENST00000516747 97 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 MIR3672-201ENST00000584290 82 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 AC060780.3-201ENST00000589464 80 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.783-201ENST00000613546 102 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SNRNP40Q96DI7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 SNORA18.2-201ENST00000383865 132 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 RNA5SP501-201ENST00000410990 112 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AC139712.2-201ENST00000424302 339 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 Z82205.1-201ENST00000428456 297 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 PCMTD1P1-201ENST00000455560 355 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 ATP5EP1-201ENST00000510257 156 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 RNA5SP182-201ENST00000516064 82 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 RNU6-358P-201ENST00000516564 75 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AF235103.2-201ENST00000525753 346 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AC018638.8-201ENST00000588755 281 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 MIR3976-201ENST00000606807 139 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 AC100810.6-201ENST00000638068 285 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SNRNP40Q96DI7 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 Y_RNA.248-201ENST00000364501 109 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 SNORD31B-201ENST00000364977 69 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 RNU6-831P-201ENST00000384548 107 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 SNORA8-201ENST00000384574 139 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 MIR320B2-201ENST00000408479 138 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 RPL30P16-201ENST00000419341 429 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 NFU1P2-201ENST00000448700 469 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 TOMM22P6-201ENST00000465035 409 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 MRPS36P4-201ENST00000534436 298 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 MIR3942-201ENST00000585264 109 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC008749.1-201ENST00000597650 306 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AL133215.3-201ENST00000609801 448 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC137590.2-201ENST00000619709 240 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 AC009033.1-201ENST00000624279 431 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.85□□□□□ -2.11
SNRNP40Q96DI7 CBX3P1-201ENST00000325243 554 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU6-562P-201ENST00000362731 107 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU1-76P-201ENST00000362903 159 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 SNORD114-6-201ENST00000364393 72 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU6-95P-201ENST00000384697 107 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 MTATP6P13-201ENST00000438531 667 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 MTND1P11-201ENST00000456661 876 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU1-131P-201ENST00000458943 161 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU7-187P-201ENST00000458985 68 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC110588.1-201ENST00000559699 137 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC026470.2-201ENST00000561492 181 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 POLR3GP2-201ENST00000588366 668 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 RMST_6.1-201ENST00000611980 203 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AC005562.2-201ENST00000618264 111 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 AL359697.1-201ENST00000624879 587 ntBASIC1.84□□□□□ -2.11
SNRNP40Q96DI7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.86-201ENST00000363020 111 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 RNU5B-2P-201ENST00000363036 113 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 Y_RNA.151-201ENST00000363566 112 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 EIF4EP2-201ENST00000422816 654 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AL590632.1-201ENST00000424289 371 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 AC108667.1-201ENST00000428618 249 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 ACA59.1-201ENST00000515966 143 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.83□□□□□ -2.12
SNRNP40Q96DI7 MIR5006-201ENST00000583027 110 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms