Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC010486.2-201ENST00000505572 483 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC079140.2-201ENST00000506193 142 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 RNU2-34P-201ENST00000516534 121 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 Y_RNA.717-201ENST00000517106 92 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 RNU6-323P-201ENST00000521915 107 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 MIR4528-201ENST00000577763 90 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 SNORA59B-202ENST00000578183 701 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AL391646.1-201ENST00000603860 190 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC008536.2-201ENST00000607284 349 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC087683.2-201ENST00000611384 326 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC008147.4-201ENST00000617570 1204 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 AC100821.1-201ENST00000523153 2479 ntBASIC1.17□□□□□ -2.22
ECHDC3Q96DC8 RNU6-545P-201ENST00000362681 104 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNU5B-2P-201ENST00000363036 113 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 Y_RNA.132-201ENST00000363421 102 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 Y_RNA.169-201ENST00000363745 96 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNU6-996P-201ENST00000365438 107 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 SNORA18.2-201ENST00000383865 132 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNU6-1026P-201ENST00000384465 108 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 SNORD73A-201ENST00000386062 65 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 MIR300-201ENST00000401138 83 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 MIR1283-1-201ENST00000408494 87 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 CST2P1-201ENST00000425770 87 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 AL163973.1-201ENST00000484753 577 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 AC011406.1-201ENST00000512440 370 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 SNORA14.1-201ENST00000516113 141 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNU6-1041P-201ENST00000516254 102 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNA5SP384-201ENST00000516615 116 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 RNU6-612P-201ENST00000516909 102 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 AC040904.1-201ENST00000590850 223 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 BX322639.1-202ENST00000423987 2213 ntBASIC1.16□□□□□ -2.22
ECHDC3Q96DC8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 SNORD33-201ENST00000362761 85 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU6-227P-201ENST00000362865 103 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU6-877P-201ENST00000383868 107 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU5A-6P-201ENST00000384136 116 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1158P-201ENST00000391167 107 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1093P-201ENST00000391194 107 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AL049545.1-201ENST00000401856 572 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU2-7P-201ENST00000410794 178 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 MTCO2P19-201ENST00000427513 598 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 MTCO3P29-201ENST00000432119 779 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 MTCO2P18-201ENST00000457151 658 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU7-63P-201ENST00000459054 62 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1037P-201ENST00000459571 107 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RPL30P7-201ENST00000479312 323 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC093852.1-201ENST00000503587 266 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 ARL2BPP4-201ENST00000506854 471 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 RPL39P5-202ENST00000512505 151 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC019176.1-201ENST00000518519 225 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 MIR3937-201ENST00000580135 106 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC087683.1-201ENST00000591187 441 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 NIFKP6-201ENST00000598115 845 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 uc_338.34-201ENST00000617467 174 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC126177.8-201ENST00000618339 1015 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 MIR338-201ENST00000636369 67 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 AC009541.1-201ENST00000438279 2662 ntBASIC1.15□□□□□ -2.23
ECHDC3Q96DC8 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 RNU6-418P-201ENST00000384035 107 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 SNORA29-201ENST00000384183 140 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 EIF1P1-201ENST00000421436 341 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AL591704.2-201ENST00000421658 181 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AC069257.2-201ENST00000441819 155 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 USP9YP29-201ENST00000445112 563 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 MTND4P7-201ENST00000523876 130 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 RAB11AP2-201ENST00000545905 639 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AC145350.1-201ENST00000567426 208 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AC087752.4-201ENST00000605911 462 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AL078604.3-201ENST00000615580 211 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 AC091812.1-201ENST00000432235 1948 ntBASIC1.14□□□□□ -2.23
ECHDC3Q96DC8 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 SNORA75-201ENST00000384158 137 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 RN7SKP142-201ENST00000411236 328 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC092447.3-201ENST00000426027 686 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 snoU13.6-201ENST00000458785 104 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC091435.1-201ENST00000505442 584 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AC025465.4-201ENST00000513422 638 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 RNU6-1069P-201ENST00000516612 133 ntBASIC1.13□□□□□ -2.23
ECHDC3Q96DC8 AP005136.1-201ENST00000579765 429 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms