Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RNU6-793P-201ENST00000384233 104 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 MRPL42P3-201ENST00000401492 326 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 RNA5SP504-201ENST00000410676 117 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.06□□□□□ -2.4
AP3S1Q92572 RPL23AP50-201ENST00000434149 455 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.06□□□□□ -2.4
AP3S1Q92572 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.06□□□□□ -2.4
AP3S1Q92572 TAF9P1-201ENST00000445421 515 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 TAF9P2-201ENST00000454958 515 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.06□□□□□ -2.4
AP3S1Q92572 RBBP4P6-201ENST00000508098 202 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 RNU6-917P-201ENST00000516294 104 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 MTATP6P15-201ENST00000527233 835 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 MIR4307-201ENST00000582802 84 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 Z99497.2-201ENST00000603634 310 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 AL359075.3-201ENST00000613288 217 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 AL138726.1-201ENST00000614873 333 ntBASIC0.06□□□□□ -2.4
AP3S1Q92572 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.06□□□□□ -2.4
AP3S1Q92572 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.06□□□□□ -2.4
AP3S1Q92572 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
AP3S1Q92572 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
AP3S1Q92572 MIR103A1-201ENST00000362165 78 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 RNU1-133P-201ENST00000364867 167 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 Y_RNA.330-201ENST00000365230 109 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 AC090960.1-201ENST00000421072 306 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.05□□□□□ -2.4
AP3S1Q92572 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 snoU13.25-201ENST00000458945 104 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 AC079382.1-201ENST00000493346 557 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 DEFB131C-201ENST00000528817 165 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.05□□□□□ -2.4
AP3S1Q92572 AL391903.3-201ENST00000612158 163 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 AP000484.1-201ENST00000620067 1252 ntBASIC0.05□□□□□ -2.4
AP3S1Q92572 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-37P-201ENST00000362692 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-11P-201ENST00000364234 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-25P-201ENST00000383873 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-1-201ENST00000383898 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-48P-201ENST00000384161 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-36P-201ENST00000384172 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-4P-201ENST00000384205 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-5P-201ENST00000384238 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-3P-201ENST00000384314 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 Y_RNA.472-201ENST00000384322 102 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 SNORA24.1-201ENST00000384401 135 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-15P-201ENST00000384534 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-2-201ENST00000384627 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-29P-201ENST00000384637 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-9-201ENST00000384776 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-33P-201ENST00000384793 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 MIR549A-201ENST00000385268 96 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 MIR140-201ENST00000385282 100 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 MIR936-201ENST00000401264 98 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 SNAP23P1-201ENST00000433229 246 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AC005002.2-201ENST00000438228 269 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 LINC01399-202ENST00000458450 244 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-1223P-201ENST00000517124 104 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
AP3S1Q92572 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.04□□□□□ -2.4
AP3S1Q92572 AC131055.1-201ENST00000584626 316 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AC008521.1-201ENST00000587471 187 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 RNU6-6P-201ENST00000606623 107 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AL139022.2-201ENST00000606934 443 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AL121895.2-201ENST00000619558 447 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 AC091948.2-201ENST00000636510 279 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 U6.108-201ENST00000637764 58 ntBASIC0.04□□□□□ -2.4
AP3S1Q92572 SNORA36A-201ENST00000384221 132 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 Y_RNA.465-201ENST00000384293 102 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
AP3S1Q92572 AL136310.1-201ENST00000404926 654 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 RNA5SP247-201ENST00000411181 105 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 MTCO2P7-201ENST00000446518 666 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.03□□□□□ -2.4
AP3S1Q92572 AC010486.2-201ENST00000505572 483 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 MTND4LP26-201ENST00000518144 282 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 AC004584.2-201ENST00000570407 410 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.03□□□□□ -2.4
AP3S1Q92572 AC004832.4-201ENST00000608952 331 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 AL096861.1-201ENST00000610899 123 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 AC008250.2-201ENST00000615261 205 ntBASIC0.03□□□□□ -2.4
AP3S1Q92572 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
AP3S1Q92572 RNU4-45P-201ENST00000365469 141 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 Y_RNA.504-201ENST00000384481 104 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 RPS29P13-201ENST00000402041 169 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 ERHP2-201ENST00000402323 299 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 MRPS18CP6-201ENST00000423587 223 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AL162725.1-201ENST00000435405 301 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3S1Q92572 AC074290.1-201ENST00000448883 135 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3S1Q92572 RPS20P10-201ENST00000451209 253 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AC013470.1-201ENST00000453438 462 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 OR9P1P-201ENST00000496431 281 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AC008628.2-201ENST00000502605 298 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AC022868.1-201ENST00000517767 391 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 AC022616.6-201ENST00000520479 119 ntBASIC0.02□□□□□ -2.41
AP3S1Q92572 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.02□□□□□ -2.41
AP3S1Q92572 AC109810.1-201ENST00000534066 224 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms