Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RN7SL499P-201ENST00000481141 276 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RNA5SP112-201ENST00000515937 99 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 MIR4659A-201ENST00000580269 81 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AL162274.2-201ENST00000614406 332 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AC080100.1-201ENST00000624239 5356 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 BX322639.1-202ENST00000423987 2213 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 AC110774.1-201ENST00000623567 2018 ntBASIC2.8□□□□□ -1.96
ATG4AQ8WYN0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 RNU1-112P-201ENST00000364401 164 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 RNU6-472P-201ENST00000384299 107 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 MIR329-1-201ENST00000385028 80 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AL079342.1-201ENST00000401460 267 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 RNU6-121P-201ENST00000410525 99 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 RPL39P40-201ENST00000445481 146 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 RPL31P41-201ENST00000477967 372 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AC103810.1-201ENST00000579873 453 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 MIR4635-201ENST00000583759 79 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 PCGEM1.1-201ENST00000613431 131 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 AC011476.5-201ENST00000615594 130 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 ZNF204P-201ENST00000416749 2397 ntBASIC2.79□□□□□ -1.96
ATG4AQ8WYN0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC103988.1-201ENST00000566382 2177 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC026241.1-201ENST00000517873 2142 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 RNU6-245P-201ENST00000384020 107 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 RNU6-378P-201ENST00000384324 107 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 MIR128-1-201ENST00000384921 82 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 MT-TG-201ENST00000387429 68 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 RNA5SP210-201ENST00000391034 120 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AL138827.1-201ENST00000402666 306 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 MIR1302-6-201ENST00000408466 90 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 PCNPP5-201ENST00000452246 481 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC145146.1-201ENST00000496370 254 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AP003733.2-201ENST00000529409 171 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC079600.2-201ENST00000550076 130 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC110588.1-201ENST00000559699 137 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC008739.2-201ENST00000597006 317 ntBASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.78□□□□□ -1.96
ATG4AQ8WYN0 AC099654.7-201ENST00000635788 2127 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 RNU6-486P-201ENST00000363116 107 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.376-201ENST00000365638 108 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 RNU6-926P-201ENST00000384075 107 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 RPL21P38-201ENST00000418090 167 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC022080.3-201ENST00000544433 482 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC023824.2-201ENST00000566185 400 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC136932.1-201ENST00000574771 208 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 MIR4300-201ENST00000581016 96 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 AC010999.1-201ENST00000611856 324 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 MIR376A1-201ENST00000616574 68 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 U6.104-201ENST00000637979 90 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 LINC02555-201ENST00000563933 1951 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ATG4AQ8WYN0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 AC069528.2-201ENST00000624849 1991 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 snoU2_19.1-201ENST00000362361 80 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.143-201ENST00000363520 106 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 Y_RNA.288-201ENST00000364854 92 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 SNORD21-201ENST00000383953 95 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 MIR549A-201ENST00000385268 96 ntBASIC2.76□□□□□ -1.97
ATG4AQ8WYN0 MT-TW-201ENST00000387382 68 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms