Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.57□□□□□ -2
USP38Q8NB14 AC112487.2-201ENST00000637950 304 ntBASIC2.57□□□□□ -2
USP38Q8NB14 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.57□□□□□ -2
USP38Q8NB14 AC092881.1-201ENST00000638218 2733 ntBASIC2.57□□□□□ -2
USP38Q8NB14 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
USP38Q8NB14 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.56□□□□□ -2
USP38Q8NB14 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
USP38Q8NB14 RNU5B-2P-201ENST00000363036 113 ntBASIC2.56□□□□□ -2
USP38Q8NB14 Y_RNA.116-201ENST00000363292 103 ntBASIC2.56□□□□□ -2
USP38Q8NB14 Y_RNA.263-201ENST00000364659 114 ntBASIC2.56□□□□□ -2
USP38Q8NB14 RNU5E-4P-201ENST00000364931 120 ntBASIC2.56□□□□□ -2
USP38Q8NB14 RNU1-51P-201ENST00000365345 176 ntBASIC2.56□□□□□ -2
USP38Q8NB14 Y_RNA.404-201ENST00000383978 102 ntBASIC2.56□□□□□ -2
USP38Q8NB14 Y_RNA.474-201ENST00000384341 102 ntBASIC2.56□□□□□ -2
USP38Q8NB14 U8.13-201ENST00000390842 128 ntBASIC2.56□□□□□ -2
USP38Q8NB14 MIR1294-201ENST00000408503 142 ntBASIC2.56□□□□□ -2
USP38Q8NB14 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.56□□□□□ -2
USP38Q8NB14 AL353997.1-201ENST00000432936 108 ntBASIC2.56□□□□□ -2
USP38Q8NB14 Z82188.1-201ENST00000436709 154 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AC007677.1-201ENST00000445757 515 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.56□□□□□ -2
USP38Q8NB14 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.56□□□□□ -2
USP38Q8NB14 FRG2DP-202ENST00000566967 323 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AL355375.2-201ENST00000574825 175 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.56□□□□□ -2
USP38Q8NB14 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.56□□□□□ -2
USP38Q8NB14 snoU13.31-201ENST00000607291 104 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AC245884.12-201ENST00000615364 59 ntBASIC2.56□□□□□ -2
USP38Q8NB14 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.56□□□□□ -2
USP38Q8NB14 MTND4LP32-201ENST00000636111 270 ntBASIC2.56□□□□□ -2
USP38Q8NB14 AL669831.3-213ENST00000636676 183 ntBASIC2.56□□□□□ -2
USP38Q8NB14 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.56□□□□□ -2
USP38Q8NB14 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.56□□□□□ -2
USP38Q8NB14 Y_RNA.387-201ENST00000383918 102 ntBASIC2.55□□□□□ -2
USP38Q8NB14 SNORA6-201ENST00000384033 151 ntBASIC2.55□□□□□ -2
USP38Q8NB14 SNORA67.3-201ENST00000384366 140 ntBASIC2.55□□□□□ -2
USP38Q8NB14 MIR32-201ENST00000384965 70 ntBASIC2.55□□□□□ -2
USP38Q8NB14 MIR518E-201ENST00000385252 88 ntBASIC2.55□□□□□ -2
USP38Q8NB14 MIR549A-201ENST00000385268 96 ntBASIC2.55□□□□□ -2
USP38Q8NB14 SNORA26.9-201ENST00000391322 122 ntBASIC2.55□□□□□ -2
USP38Q8NB14 MTCYBP2-201ENST00000407745 171 ntBASIC2.55□□□□□ -2
USP38Q8NB14 RNU6-321P-201ENST00000410912 106 ntBASIC2.55□□□□□ -2
USP38Q8NB14 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.55□□□□□ -2
USP38Q8NB14 RPL30P15-201ENST00000457129 321 ntBASIC2.55□□□□□ -2
USP38Q8NB14 SNORA4.4-201ENST00000515921 135 ntBASIC2.55□□□□□ -2
USP38Q8NB14 RNA5SP384-201ENST00000516615 116 ntBASIC2.55□□□□□ -2
USP38Q8NB14 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.55□□□□□ -2
USP38Q8NB14 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.55□□□□□ -2
USP38Q8NB14 AC090517.1-201ENST00000569307 266 ntBASIC2.55□□□□□ -2
USP38Q8NB14 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.55□□□□□ -2
USP38Q8NB14 MIR5690-201ENST00000583739 73 ntBASIC2.55□□□□□ -2
USP38Q8NB14 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.55□□□□□ -2
USP38Q8NB14 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.55□□□□□ -2
USP38Q8NB14 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
USP38Q8NB14 Y_RNA.67-201ENST00000362870 100 ntBASIC2.54□□□□□ -2
USP38Q8NB14 Y_RNA.259-201ENST00000364619 101 ntBASIC2.54□□□□□ -2
USP38Q8NB14 RNU6-596P-201ENST00000365395 98 ntBASIC2.54□□□□□ -2
USP38Q8NB14 SNORA25B-201ENST00000365507 128 ntBASIC2.54□□□□□ -2
USP38Q8NB14 RNU6-1297P-201ENST00000384415 104 ntBASIC2.54□□□□□ -2
USP38Q8NB14 SNORA17.3-201ENST00000391159 129 ntBASIC2.54□□□□□ -2
USP38Q8NB14 RNA5SP201-201ENST00000410316 124 ntBASIC2.54□□□□□ -2
USP38Q8NB14 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.54□□□□□ -2
USP38Q8NB14 AL358453.1-201ENST00000422522 250 ntBASIC2.54□□□□□ -2
USP38Q8NB14 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.54□□□□□ -2
USP38Q8NB14 SNRPEP8-201ENST00000442866 260 ntBASIC2.54□□□□□ -2
USP38Q8NB14 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.54□□□□□ -2
USP38Q8NB14 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.54□□□□□ -2
USP38Q8NB14 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.54□□□□□ -2
USP38Q8NB14 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
USP38Q8NB14 RNU6-277P-201ENST00000516272 106 ntBASIC2.54□□□□□ -2
USP38Q8NB14 Y_RNA.675-201ENST00000516389 149 ntBASIC2.54□□□□□ -2
USP38Q8NB14 SCARNA16.2-201ENST00000516520 172 ntBASIC2.54□□□□□ -2
USP38Q8NB14 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
USP38Q8NB14 EIF4A1P12-201ENST00000551910 141 ntBASIC2.54□□□□□ -2
USP38Q8NB14 AC009127.3-201ENST00000570531 403 ntBASIC2.54□□□□□ -2
USP38Q8NB14 U4atac.1-201ENST00000618345 95 ntBASIC2.54□□□□□ -2
USP38Q8NB14 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.54□□□□□ -2
USP38Q8NB14 ZNF299P-201ENST00000406845 1804 ntBASIC2.54□□□□□ -2
USP38Q8NB14 RNU4-9P-201ENST00000364951 139 ntBASIC2.53□□□□□ -2
USP38Q8NB14 USMG5P1-201ENST00000425964 177 ntBASIC2.53□□□□□ -2
USP38Q8NB14 AC107032.1-201ENST00000485945 480 ntBASIC2.53□□□□□ -2
USP38Q8NB14 AC068781.1-201ENST00000488231 618 ntBASIC2.53□□□□□ -2
USP38Q8NB14 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.53□□□□□ -2
USP38Q8NB14 RNU6-667P-201ENST00000517186 102 ntBASIC2.53□□□□□ -2
USP38Q8NB14 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.53□□□□□ -2
USP38Q8NB14 APOOP3-201ENST00000536787 586 ntBASIC2.53□□□□□ -2
USP38Q8NB14 AC093027.1-201ENST00000546698 429 ntBASIC2.53□□□□□ -2
USP38Q8NB14 MIR5696-201ENST00000578474 85 ntBASIC2.53□□□□□ -2
USP38Q8NB14 MIR5694-201ENST00000581190 76 ntBASIC2.53□□□□□ -2
USP38Q8NB14 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.53□□□□□ -2
USP38Q8NB14 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.53□□□□□ -2
USP38Q8NB14 SCARNA4-201ENST00000629045 128 ntBASIC2.53□□□□□ -2
USP38Q8NB14 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.52□□□□□ -2.01
USP38Q8NB14 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USP38Q8NB14 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
USP38Q8NB14 Y_RNA.58-201ENST00000362807 102 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 Y_RNA.154-201ENST00000363624 102 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 RNY3P1-201ENST00000365085 102 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 RNY3-201ENST00000365484 102 ntBASIC2.52□□□□□ -2.01
USP38Q8NB14 Y_RNA.490-201ENST00000384413 102 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms