Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RPL23AP3-201ENST00000453844 468 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AC026782.1-201ENST00000512952 449 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 AC025754.2-201ENST00000606491 432 ntBASIC1.94□□□□□ -2.1
CCDC63Q8NA47 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.94□□□□□ -2.1
CCDC63Q8NA47 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.166-201ENST00000363730 102 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.473-201ENST00000384333 102 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AL023284.1-201ENST00000403956 276 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 RNU2-20P-201ENST00000410425 191 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC004866.1-201ENST00000411748 78 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC243428.1-201ENST00000421099 264 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC63Q8NA47 RPS3AP52-201ENST00000435639 297 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC007215.1-201ENST00000464893 276 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 RPL31P58-201ENST00000469001 379 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 RNU1-54P-201ENST00000517181 120 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC074050.1-201ENST00000563247 211 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC011494.1-201ENST00000596454 237 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC022306.2-201ENST00000617563 647 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 AC099654.14-201ENST00000638599 341 ntBASIC1.93□□□□□ -2.1
CCDC63Q8NA47 SNORD114-6-201ENST00000364393 72 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.533-201ENST00000384596 114 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 RNA5SP465-201ENST00000391195 109 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AC138393.2-201ENST00000414742 246 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 HMGB1P18-201ENST00000438801 619 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AL353689.1-201ENST00000438895 199 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AL035666.1-201ENST00000446195 348 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AC245102.2-201ENST00000448956 180 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 RNU5F-4P-201ENST00000516581 114 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 SNORA20.3-201ENST00000516880 132 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 MIR3162-201ENST00000581818 82 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AC018462.2-201ENST00000605375 395 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC63Q8NA47 AP006437.1-201ENST00000641440 3685 ntBASIC1.92□□□□□ -2.1
CCDC63Q8NA47 RNA5SP276-201ENST00000362580 94 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 Y_RNA.88-201ENST00000363029 99 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 SNORD115-32-201ENST00000364079 82 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RNU4-9P-201ENST00000364951 139 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 SNORD81.2-201ENST00000365153 76 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC074085.1-201ENST00000413598 418 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AL158823.1-201ENST00000418441 478 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RPL31P63-201ENST00000422565 375 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RNU7-14P-201ENST00000459331 62 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RPL30P10-201ENST00000488148 337 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC103851.1-201ENST00000506833 274 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 PRDX4P1-201ENST00000507189 574 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RNU6-1016P-201ENST00000516689 94 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC024614.2-201ENST00000577584 372 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 RPL17P51-201ENST00000605218 238 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AC005562.2-201ENST00000618264 111 ntBASIC1.91□□□□□ -2.1
CCDC63Q8NA47 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC63Q8NA47 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
CCDC63Q8NA47 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.9□□□□□ -2.1
CCDC63Q8NA47 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.9□□□□□ -2.1
CCDC63Q8NA47 SNORD31B-201ENST00000364977 69 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 SNORA67.3-201ENST00000384366 140 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 AC123900.1-201ENST00000420390 96 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 HMGN2P3-201ENST00000433603 273 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC63Q8NA47 HMGN2P5-201ENST00000436882 273 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 SNRPEP8-201ENST00000442866 260 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC63Q8NA47 MTCO3P8-201ENST00000453691 755 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 AC016925.1-201ENST00000458303 298 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 HMGN1P12-201ENST00000499125 195 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.691-201ENST00000516611 103 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 AC005296.1-201ENST00000616145 209 ntBASIC1.9□□□□□ -2.11
CCDC63Q8NA47 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
CCDC63Q8NA47 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC63Q8NA47 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 RNU1-58P-201ENST00000362413 163 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 SNORD115-8-201ENST00000363856 82 ntBASIC1.89□□□□□ -2.11
CCDC63Q8NA47 SNORD115-38-201ENST00000365037 82 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms