Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AP005660.1-201ENST00000522972 293 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 MIR3136-201ENST00000583498 78 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AL096840.1-201ENST00000603287 93 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AL034555.1-201ENST00000604816 211 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC018889.1-201ENST00000605372 397 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC018462.2-201ENST00000605375 395 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC016727.1-205ENST00000605437 569 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AP000654.2-201ENST00000605633 586 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC124303.1-201ENST00000605703 360 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 MIR8076-201ENST00000611401 83 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 MIR1302-1-201ENST00000637932 143 ntBASIC2.01□□□□□ -2.09
RTL3Q8N8U3 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
RTL3Q8N8U3 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2□□□□□ -2.09
RTL3Q8N8U3 SNORD114-1-201ENST00000362705 72 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 RNU6-227P-201ENST00000362865 103 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 RNU4-73P-201ENST00000363164 141 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 RNU6-1141P-201ENST00000364520 107 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
RTL3Q8N8U3 RNA5SP338-201ENST00000410495 85 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 PCMTD1P1-201ENST00000455560 355 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.635-201ENST00000459041 101 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2□□□□□ -2.09
RTL3Q8N8U3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2□□□□□ -2.09
RTL3Q8N8U3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2□□□□□ -2.09
RTL3Q8N8U3 AL355375.2-201ENST00000574825 175 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2□□□□□ -2.09
RTL3Q8N8U3 SNRPGP19-201ENST00000603826 189 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 CYP2C61P-201ENST00000604072 290 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 SNORD98-201ENST00000636377 67 ntBASIC2□□□□□ -2.09
RTL3Q8N8U3 AC233981.2-201ENST00000611524 1614 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 KPNA2P1-201ENST00000458289 1591 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.61-201ENST00000362835 102 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-797P-201ENST00000363101 109 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.356-201ENST00000365475 113 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 Y_RNA.387-201ENST00000383918 102 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-43P-201ENST00000384302 107 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-784P-201ENST00000384330 106 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-306P-201ENST00000384617 107 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 SNORA26.3-201ENST00000391119 136 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-174P-201ENST00000410406 106 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RN7SKP61-201ENST00000410642 295 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC244636.1-201ENST00000421152 228 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC244670.1-201ENST00000436879 112 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 FTH1P25-201ENST00000447665 469 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RPL23AP42-201ENST00000471152 471 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC114801.2-201ENST00000503825 781 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC093259.1-201ENST00000509755 300 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU6-991P-201ENST00000516168 107 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNA5SP364-201ENST00000516938 78 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 RNU1-54P-201ENST00000517181 120 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC093027.1-201ENST00000546698 429 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC011494.1-201ENST00000596454 237 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AC019193.3-201ENST00000609144 554 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 MIR6128-201ENST00000615528 109 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AL359757.2-201ENST00000624309 274 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 MIR1248-201ENST00000629190 106 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 AP000553.5-201ENST00000641933 54 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.99□□□□□ -2.09
RTL3Q8N8U3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AP000560.1-201ENST00000624150 1937 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 RNU1-58P-201ENST00000362413 163 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 RNU4-79P-201ENST00000362764 141 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 SNORD50.1-201ENST00000362987 71 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 RNU6-842P-201ENST00000384269 107 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 SNORD116-29-201ENST00000384516 83 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 RNU6-601P-201ENST00000384540 107 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AL357139.1-201ENST00000407792 426 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 USP9YP30-201ENST00000430729 455 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AC079354.2-201ENST00000453523 154 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 RNU7-152P-201ENST00000458982 64 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 MIR3976-201ENST00000606807 139 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
RTL3Q8N8U3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 SNORA43.4-201ENST00000629559 138 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 AL450472.1-202ENST00000637286 180 ntBASIC1.98□□□□□ -2.09
RTL3Q8N8U3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.97□□□□□ -2.09
RTL3Q8N8U3 RNU6-1188P-201ENST00000363795 107 ntBASIC1.97□□□□□ -2.09
RTL3Q8N8U3 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
RTL3Q8N8U3 RNU6-142P-201ENST00000384019 107 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms