Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MIR1302-11-201ENST00000408051 138 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 MIR1302-9-201ENST00000408365 138 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 MIR1302-10-201ENST00000408734 138 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 MTCO3P29-201ENST00000432119 779 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 RPS12P2-201ENST00000439728 269 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 OR2AQ1P-201ENST00000451972 200 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.631-201ENST00000459607 101 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC073901.1-201ENST00000462471 408 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC023141.11-201ENST00000508864 202 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC021269.2-201ENST00000532318 330 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC020661.2-201ENST00000560114 134 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC004584.2-201ENST00000570407 410 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 MIR3923-201ENST00000579521 83 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 7SK.7-201ENST00000603504 247 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 SNRPGP17-201ENST00000603780 214 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 MIR1302-2-201ENST00000607096 138 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC046143.2-201ENST00000609789 160 ntBASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VPS52Q8N1B4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNA5SP456-201ENST00000364002 114 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.405-201ENST00000383979 100 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.451-201ENST00000384200 100 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.496-201ENST00000384444 101 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.524-201ENST00000384564 100 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNU6-1011P-201ENST00000384668 107 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.561-201ENST00000384694 100 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNU6-220P-201ENST00000390919 107 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNU6-700P-201ENST00000391043 107 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 MIR548P-201ENST00000408336 84 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AL356320.1-201ENST00000429616 163 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AC005534.2-201ENST00000431047 433 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AC099799.1-201ENST00000439809 192 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 IPO7P1-201ENST00000442031 636 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNU7-175P-201ENST00000515915 61 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 MYL12BP1-201ENST00000569826 507 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 AC100812.1-201ENST00000607622 580 ntBASIC2.6□□□□□ -1.99
VPS52Q8N1B4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VPS52Q8N1B4 RNU6-874P-201ENST00000362390 105 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 SNORD115-8-201ENST00000363856 82 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 SNORD115-38-201ENST00000365037 82 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 RNU6-443P-201ENST00000384780 107 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 MIR29B2-201ENST00000385055 81 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 MIR95-201ENST00000385072 81 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 DPH3P2-201ENST00000422618 250 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 MRPS18CP6-201ENST00000423587 223 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 AC140059.1-201ENST00000489238 361 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 RNA5SP402-201ENST00000517148 110 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 IGLV3-17-201ENST00000519099 244 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 IGKV3-31-201ENST00000523109 329 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
VPS52Q8N1B4 AC009127.3-201ENST00000570531 403 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.59□□□□□ -1.99
VPS52Q8N1B4 AC245884.12-201ENST00000615364 59 ntBASIC2.59□□□□□ -1.99
VPS52Q8N1B4 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
VPS52Q8N1B4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.58□□□□□ -2
VPS52Q8N1B4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
VPS52Q8N1B4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.58□□□□□ -2
VPS52Q8N1B4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.58□□□□□ -2
VPS52Q8N1B4 RNU6-137P-201ENST00000363680 108 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 RNU1-115P-201ENST00000365329 160 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 MIR153-2-201ENST00000385225 87 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 RNU6-1156P-201ENST00000410365 100 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AC007098.1-201ENST00000420122 367 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 PMCHL1-202ENST00000423102 261 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AL035666.1-201ENST00000446195 348 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.58□□□□□ -2
VPS52Q8N1B4 snoU13.6-201ENST00000458785 104 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AC090096.1-201ENST00000489168 390 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.58□□□□□ -2
VPS52Q8N1B4 RNU6-237P-201ENST00000515985 71 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 RNA5SP281-201ENST00000516504 135 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.58□□□□□ -2
VPS52Q8N1B4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.58□□□□□ -2
VPS52Q8N1B4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.58□□□□□ -2
VPS52Q8N1B4 MIR4524B-201ENST00000581569 115 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.58□□□□□ -2
VPS52Q8N1B4 AC103810.6-201ENST00000606708 136 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 AL355802.3-201ENST00000607571 545 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 PCGEM1.1-201ENST00000613431 131 ntBASIC2.58□□□□□ -2
VPS52Q8N1B4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms