Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 TOMM22P6-201ENST00000465035 409 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 RPS29P25-201ENST00000481709 171 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC011352.1-201ENST00000512300 793 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 RNU6-295P-201ENST00000516901 104 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 DEFB131C-201ENST00000528817 165 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 MIR3672-201ENST00000584290 82 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC068790.6-201ENST00000602558 258 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL773524.1-201ENST00000614065 229 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AL590240.4-201ENST00000616908 390 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC130454.1-201ENST00000622948 401 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC009033.1-201ENST00000624279 431 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
SKA3Q8IX90 AC233981.2-201ENST00000611524 1614 ntBASIC1.55□□□□□ -2.16
SKA3Q8IX90 RNU1-76P-201ENST00000362903 159 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 RNU6-438P-201ENST00000365561 103 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
SKA3Q8IX90 RNU6-784P-201ENST00000384330 106 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 RNU6-1026P-201ENST00000384465 108 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 RPS26P42-201ENST00000413485 326 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 MTND1P4-201ENST00000435196 415 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 DAP3P1-201ENST00000441522 278 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 RNU7-14P-201ENST00000459331 62 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC116337.1-201ENST00000509680 687 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 CBX3P4-201ENST00000538909 354 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 FGF7P1-201ENST00000582820 288 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC011494.1-201ENST00000596454 237 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AL158827.2-201ENST00000602494 330 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC016727.2-201ENST00000603988 621 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 CYP2C61P-201ENST00000604072 290 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AL022345.1-201ENST00000607292 135 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.54□□□□□ -2.16
SKA3Q8IX90 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AC084768.2-201ENST00000622736 221 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 AL691447.3-201ENST00000635020 330 ntBASIC1.54□□□□□ -2.16
SKA3Q8IX90 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 SNORA12.2-201ENST00000391040 156 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
SKA3Q8IX90 AL158823.1-201ENST00000418441 478 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC123900.1-201ENST00000420390 96 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC139712.2-201ENST00000424302 339 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AL353572.1-201ENST00000442490 417 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC087477.1-201ENST00000465747 340 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SKA3Q8IX90 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 MIR3169-201ENST00000578032 83 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 POLR3GP2-201ENST00000588366 668 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC005562.2-201ENST00000618264 111 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AC006504.8-201ENST00000621046 635 ntBASIC1.53□□□□□ -2.16
SKA3Q8IX90 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.53□□□□□ -2.16
SKA3Q8IX90 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SKA3Q8IX90 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SKA3Q8IX90 MIR340-201ENST00000362125 95 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 RNA5SP493-201ENST00000364115 91 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 SNORD114-6-201ENST00000364393 72 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 SNORD116-11-201ENST00000383882 92 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 RNU6-306P-201ENST00000384617 107 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 MIR549A-201ENST00000385268 96 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 RNU6-192P-201ENST00000391253 100 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 RNA5SP501-201ENST00000410990 112 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 FCF1P9-201ENST00000412546 282 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AL358453.1-201ENST00000422522 250 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.52□□□□□ -2.17
SKA3Q8IX90 AL035666.1-201ENST00000446195 348 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AC016925.1-201ENST00000458303 298 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.52□□□□□ -2.17
SKA3Q8IX90 RNU6-864P-201ENST00000516256 108 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AC026470.2-201ENST00000561492 181 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 MIR3618-201ENST00000580330 88 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 MIR8081-201ENST00000611533 95 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AC093913.1-201ENST00000614178 329 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 AC098679.4-201ENST00000624241 654 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 LINC02555-201ENST00000563933 1951 ntBASIC1.52□□□□□ -2.17
SKA3Q8IX90 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SKA3Q8IX90 SNORD50.1-201ENST00000362987 71 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 SNORD48-201ENST00000364953 64 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 SNORD31B-201ENST00000364977 69 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 RNU6-831P-201ENST00000384548 107 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 SNORA8-201ENST00000384574 139 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.51□□□□□ -2.17
SKA3Q8IX90 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.51□□□□□ -2.17
SKA3Q8IX90 AC007677.1-201ENST00000445757 515 ntBASIC1.51□□□□□ -2.17
SKA3Q8IX90 OR2AQ1P-201ENST00000451972 200 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms