Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNU6-923P-201ENST00000364753 107 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 SNORA12-201ENST00000391162 147 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 RNA5SP475-201ENST00000410568 110 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 RNU7-120P-201ENST00000459334 63 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-861P-201ENST00000516745 106 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 RNU1-117P-201ENST00000517041 158 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 AC093331.1-201ENST00000521474 169 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 MIR5006-201ENST00000583027 110 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 MIR4282-201ENST00000583613 67 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 DEFB117-201ENST00000602356 141 ntBASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
TRIM48Q8IWZ4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 UBE2WP1-201ENST00000362030 340 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 U3.9-201ENST00000363823 204 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 RNU1-57P-201ENST00000384491 166 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 SNORA46.1-201ENST00000391069 153 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC009414.1-201ENST00000427200 443 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC074198.2-201ENST00000508153 258 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC005562.2-201ENST00000618264 111 ntBASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM48Q8IWZ4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.82-201ENST00000363000 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.92-201ENST00000363043 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.235-201ENST00000364412 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.306-201ENST00000365015 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.312-201ENST00000365089 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.322-201ENST00000365151 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 MIR483-201ENST00000385070 76 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 MIR767-201ENST00000390228 109 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 RN7SKP51-201ENST00000410781 304 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 RPS3P1-201ENST00000456781 192 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.650-201ENST00000459002 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 RPS29P26-201ENST00000477483 171 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 RNU6-191P-201ENST00000516295 94 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.777-201ENST00000516982 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.771-201ENST00000598668 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 AC010620.2-201ENST00000600135 313 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 MIR7112-201ENST00000616126 65 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 Y_RNA.789-201ENST00000622480 102 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 MIR3651-201ENST00000630427 90 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
TRIM48Q8IWZ4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
TRIM48Q8IWZ4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.21□□□□□ -1.89
TRIM48Q8IWZ4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNA5SP295-201ENST00000362655 121 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-545P-201ENST00000362681 104 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-682P-201ENST00000363843 106 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 SNORD6-201ENST00000365444 73 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU2-54P-201ENST00000410299 190 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 AC009963.1-201ENST00000417265 157 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 AC024067.1-201ENST00000426199 223 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RPS4XP2-201ENST00000458402 793 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RPS27P29-201ENST00000463110 252 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RPL31P41-201ENST00000477967 372 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 RNU2-44P-201ENST00000516795 194 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 AC079598.5-201ENST00000547460 117 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 Z83818.1-201ENST00000603584 150 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 uc_338.1-201ENST00000612113 180 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 TCL6_2.1-201ENST00000615162 119 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 AL136164.4-201ENST00000625013 2135 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 snoU18.1-201ENST00000629629 71 ntBASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
TRIM48Q8IWZ4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 AC069528.2-201ENST00000624849 1991 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 RNU6-454P-201ENST00000364292 107 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.2□□□□□ -1.9
TRIM48Q8IWZ4 Y_RNA.329-201ENST00000365209 107 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms