Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
HERC6Q8IVU3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HERC6Q8IVU3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HERC6Q8IVU3 MIR6073-201ENST00000352083 89 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 SNORD32B-201ENST00000364460 84 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 SNORA75.4-201ENST00000391278 119 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 USMG5P1-201ENST00000425964 177 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.56□□□□□ -2
HERC6Q8IVU3 AL139109.1-201ENST00000455491 297 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 HMGN2P23-201ENST00000456759 269 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 snoU13.30-201ENST00000458951 104 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 AC034114.1-201ENST00000520293 285 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.56□□□□□ -2
HERC6Q8IVU3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.56□□□□□ -2
HERC6Q8IVU3 AL590705.4-201ENST00000532209 134 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 SNRPGP18-201ENST00000553000 214 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.56□□□□□ -2
HERC6Q8IVU3 AL133255.1-201ENST00000606374 441 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 RMST_6.1-201ENST00000611980 203 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 AC098657.3-201ENST00000620434 263 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HERC6Q8IVU3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
HERC6Q8IVU3 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
HERC6Q8IVU3 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HERC6Q8IVU3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-1059P-201ENST00000363752 98 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-1188P-201ENST00000363795 107 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 SNORD115-32-201ENST00000364079 82 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-842P-201ENST00000384269 107 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-1297P-201ENST00000384415 104 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 MIR153-2-201ENST00000385225 87 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.55□□□□□ -2
HERC6Q8IVU3 AL357139.1-201ENST00000407792 426 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNA5SP181-201ENST00000410246 98 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-370P-201ENST00000411008 104 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AL358453.1-201ENST00000422522 250 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.55□□□□□ -2
HERC6Q8IVU3 AC245102.2-201ENST00000448956 180 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 snoU13.6-201ENST00000458785 104 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.55□□□□□ -2
HERC6Q8IVU3 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AC093303.1-201ENST00000514549 295 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 Y_RNA.670-201ENST00000516255 105 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 Y_RNA.701-201ENST00000516812 110 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNA5SP54-201ENST00000516951 92 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AC026470.2-201ENST00000561492 181 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AC090517.1-201ENST00000569307 266 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AC044792.1-201ENST00000593294 196 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 SNRPGP17-201ENST00000603780 214 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 SNRPGP20-201ENST00000604477 205 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.55□□□□□ -2
HERC6Q8IVU3 AC084781.2-201ENST00000615568 161 ntBASIC2.55□□□□□ -2
HERC6Q8IVU3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HERC6Q8IVU3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
HERC6Q8IVU3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.54□□□□□ -2
HERC6Q8IVU3 KPNA2P1-201ENST00000458289 1591 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 RNU6-595P-201ENST00000363944 107 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 MIR32-201ENST00000384965 70 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 RNU6-700P-201ENST00000391043 107 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 SNORA12-201ENST00000391162 147 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 RPS20P15-201ENST00000412792 311 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 CR769767.1-201ENST00000436337 346 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 AF186996.7-201ENST00000492781 209 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 HMGN1P13-201ENST00000505795 138 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.54□□□□□ -2
HERC6Q8IVU3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 RNU6-965P-201ENST00000516721 96 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 MIR4446-201ENST00000578505 67 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 AL049779.4-201ENST00000604500 156 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 AC090574.1-201ENST00000623186 233 ntBASIC2.54□□□□□ -2
HERC6Q8IVU3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.54□□□□□ -2
HERC6Q8IVU3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.54□□□□□ -2
HERC6Q8IVU3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.54□□□□□ -2
HERC6Q8IVU3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.54□□□□□ -2
HERC6Q8IVU3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.53□□□□□ -2
HERC6Q8IVU3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HERC6Q8IVU3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 Y_RNA.460-201ENST00000384255 102 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 RNU6-541P-201ENST00000384709 110 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 MIR524-201ENST00000385242 87 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 Y_RNA.579-201ENST00000390939 94 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 AC243428.1-201ENST00000421099 264 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 MTCO3P10-201ENST00000455912 772 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 RPS23P5-201ENST00000495419 428 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.53□□□□□ -2
HERC6Q8IVU3 AC107222.1-201ENST00000510899 637 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.53□□□□□ -2
HERC6Q8IVU3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 RNU6-264P-201ENST00000517134 104 ntBASIC2.53□□□□□ -2
HERC6Q8IVU3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.53□□□□□ -2
HERC6Q8IVU3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
HERC6Q8IVU3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.53□□□□□ -2
HERC6Q8IVU3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms