Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC016256.1-201ENST00000547971 354 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 MIR5701-3-201ENST00000578890 82 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 MIR5701-1-201ENST00000585138 82 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 MIR5701-2-201ENST00000615634 82 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 AC091925.1-201ENST00000623204 462 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 MIR6733-201ENST00000635723 61 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 AL450472.1-202ENST00000637286 180 ntBASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-99P-201ENST00000364721 107 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.445-201ENST00000384168 102 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 MIR489-201ENST00000384923 84 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 MIR1302-11-201ENST00000408051 138 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 MIR1302-9-201ENST00000408365 138 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 MIR1302-10-201ENST00000408734 138 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 EIF4EP4-201ENST00000424916 578 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AC108667.1-201ENST00000428618 249 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AL137792.2-201ENST00000443484 235 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AL121594.1-201ENST00000475906 575 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 RPL23AP75-201ENST00000491601 451 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 HMGB1P35-201ENST00000503360 598 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-976P-201ENST00000516086 111 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-699P-201ENST00000517081 110 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AC020661.2-201ENST00000560114 134 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 RPL30P11-203ENST00000598995 310 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 MIR1302-2-201ENST00000607096 138 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 AC134503.1-201ENST00000633048 54 ntBASIC2.89□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 RNU6-474P-201ENST00000384243 107 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC007098.1-201ENST00000420122 367 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC018865.2-201ENST00000423631 129 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC008267.5-201ENST00000424928 265 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AIMP1P2-201ENST00000425294 312 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC092423.1-201ENST00000430165 186 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC005534.2-201ENST00000431047 433 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC087477.1-201ENST00000465747 340 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 SUB1P3-201ENST00000564581 315 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 MIR5571-201ENST00000577998 113 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC023043.3-201ENST00000593113 385 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 SNRPGP17-201ENST00000603780 214 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AL034555.1-201ENST00000604816 211 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 uc_338.22-201ENST00000622722 187 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC090517.3-201ENST00000625170 141 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
KRT28Q7Z3Y7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.5-201ENST00000362334 102 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.405-201ENST00000383979 100 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.451-201ENST00000384200 100 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.524-201ENST00000384564 100 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.561-201ENST00000384694 100 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 MIR583-201ENST00000384846 75 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 MIR32-201ENST00000384965 70 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 SNORA17.3-201ENST00000391159 129 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 CBX3P9-201ENST00000402326 552 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 HMGN2P35-201ENST00000412164 270 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AL358453.1-201ENST00000422522 250 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AL590556.1-201ENST00000423231 483 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AC012306.1-201ENST00000423267 114 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 MTCYBP10-201ENST00000424905 650 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 RPL30P4-201ENST00000429309 333 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 MICF-203ENST00000432679 129 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 snoU13.30-201ENST00000458951 104 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AC023141.11-201ENST00000508864 202 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 ELOCP31-201ENST00000540463 467 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AC004584.2-201ENST00000570407 410 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 MIR3923-201ENST00000579521 83 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 Z98751.3-201ENST00000604447 521 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 AC069294.1-201ENST00000608397 350 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 SCARNA4-201ENST00000629045 128 ntBASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRT28Q7Z3Y7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AC131280.1-202ENST00000624067 4211 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.252-201ENST00000364556 101 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 SNORA48.3-201ENST00000391081 134 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 SNORA40.18-201ENST00000391200 128 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 Z82188.1-201ENST00000436709 154 ntBASIC2.86□□□□□ -1.95
KRT28Q7Z3Y7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms