Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 FO393415.2-201ENST00000480085 343 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 MIR449C-201ENST00000516047 92 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 AC011494.1-201ENST00000596454 237 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 MIR6132-201ENST00000622083 109 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.05□□□□□ -2.08
NUP54Q7Z3B4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 RNU1-76P-201ENST00000362903 159 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 SNORA72.1-201ENST00000363485 129 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 RNU6-743P-201ENST00000364151 106 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 SNORA51.11-201ENST00000384442 131 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 RNU2-41P-201ENST00000410991 178 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC243428.1-201ENST00000421099 264 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC007215.1-201ENST00000464893 276 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 MTND4P12-201ENST00000498999 1377 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC026470.2-201ENST00000561492 181 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC005730.3-201ENST00000583067 366 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 UBE2V2P2-201ENST00000587677 504 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 MIR6873-201ENST00000622788 63 ntBASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
NUP54Q7Z3B4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 ZNF299P-201ENST00000406845 1804 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.303-201ENST00000364998 94 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 RNA5SP126-201ENST00000365092 109 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 RNU4-52P-201ENST00000384209 138 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 U8.10-201ENST00000384260 133 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.490-201ENST00000384413 102 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.533-201ENST00000384596 114 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 MIR1262-201ENST00000408276 93 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 RNU6-1050P-201ENST00000410388 107 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 DPH3P2-201ENST00000422618 250 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.635-201ENST00000459041 101 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC093259.1-201ENST00000509755 300 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC008549.1-201ENST00000512900 643 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 Y_RNA.708-201ENST00000516950 96 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AL121579.1-201ENST00000555129 305 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC091544.4-201ENST00000555268 342 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AL158827.2-201ENST00000602494 330 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 7SK.7-201ENST00000603504 247 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 RMST_6.1-201ENST00000611980 203 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 AL691447.3-201ENST00000635020 330 ntBASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.03□□□□□ -2.08
NUP54Q7Z3B4 RNU1-58P-201ENST00000362413 163 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNU11-3P-201ENST00000391111 133 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 SNORA3.2-201ENST00000408221 125 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 MIR1283-2-201ENST00000408621 87 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RN7SKP192-201ENST00000411291 327 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 Z82188.1-201ENST00000436709 154 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AL035666.1-201ENST00000446195 348 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 HMGN2P18-201ENST00000450680 270 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 snoU13.30-201ENST00000458951 104 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RN7SKP210-201ENST00000459176 261 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RPS23P5-201ENST00000495419 428 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNU6-991P-201ENST00000516168 107 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 Y_RNA.670-201ENST00000516255 105 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNU6-1098P-201ENST00000516772 96 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 RNA5SP490-201ENST00000517141 136 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 MIR548S-201ENST00000581352 82 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AC016727.2-201ENST00000603988 621 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AC005562.2-201ENST00000618264 111 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
NUP54Q7Z3B4 AC005336.3-201ENST00000623833 2679 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 SNORD115-8-201ENST00000363856 82 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 RNU6-595P-201ENST00000363944 107 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 SNORD115-38-201ENST00000365037 82 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 MIR32-201ENST00000384965 70 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 MIR153-2-201ENST00000385225 87 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 MTND4P18-201ENST00000447010 465 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 RNU6-1198P-201ENST00000516904 67 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 AL590705.4-201ENST00000532209 134 ntBASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.01□□□□□ -2.09
NUP54Q7Z3B4 MIR4713-201ENST00000582691 75 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms