Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 AL359693.1-201ENST00000614959 2407 ntBASIC2.53□□□□□ -2
USP43Q70EL4 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
USP43Q70EL4 Y_RNA.8-201ENST00000362353 102 ntBASIC2.53□□□□□ -2
USP43Q70EL4 Y_RNA.292-201ENST00000364904 97 ntBASIC2.53□□□□□ -2
USP43Q70EL4 MIR1290-201ENST00000408735 78 ntBASIC2.53□□□□□ -2
USP43Q70EL4 RNA5SP181-201ENST00000410246 98 ntBASIC2.53□□□□□ -2
USP43Q70EL4 RN7SKP284-201ENST00000411002 343 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.53□□□□□ -2
USP43Q70EL4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.53□□□□□ -2
USP43Q70EL4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.53□□□□□ -2
USP43Q70EL4 AL356867.1-201ENST00000429623 299 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
USP43Q70EL4 AC092798.1-201ENST00000458542 409 ntBASIC2.53□□□□□ -2
USP43Q70EL4 RPS29P27-201ENST00000463711 170 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC139453.3-201ENST00000493276 369 ntBASIC2.53□□□□□ -2
USP43Q70EL4 SEPT14P8-201ENST00000508026 178 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC074133.1-201ENST00000515696 183 ntBASIC2.53□□□□□ -2
USP43Q70EL4 RN7SKP272-201ENST00000516988 232 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.53□□□□□ -2
USP43Q70EL4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP43Q70EL4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.53□□□□□ -2
USP43Q70EL4 AC103996.1-201ENST00000555468 102 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AL645944.1-201ENST00000603857 493 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC009318.2-201ENST00000610917 651 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AL161629.2-201ENST00000615347 275 ntBASIC2.53□□□□□ -2
USP43Q70EL4 AC243829.7-201ENST00000633081 225 ntBASIC2.53□□□□□ -2
USP43Q70EL4 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.53□□□□□ -2
USP43Q70EL4 MTND5P9-201ENST00000503854 1755 ntBASIC2.53□□□□□ -2
USP43Q70EL4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USP43Q70EL4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USP43Q70EL4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2.01
USP43Q70EL4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
USP43Q70EL4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USP43Q70EL4 AC008568.2-201ENST00000623862 2313 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 FTLP6-201ENST00000355274 422 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MIR22-201ENST00000362190 85 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 SNORD113-8-201ENST00000363497 74 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 SNORA9.2-201ENST00000365361 133 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNU6-741P-201ENST00000383889 107 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNU6-937P-201ENST00000384325 106 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNY3P4-201ENST00000384428 101 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNU6-851P-201ENST00000384565 107 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MIR521-1-201ENST00000384902 87 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MIR10A-201ENST00000385043 110 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNA5SP252-201ENST00000391131 119 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MIR190B-201ENST00000401119 79 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 MTCYBP2-201ENST00000407745 171 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.52□□□□□ -2.01
USP43Q70EL4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.52□□□□□ -2.01
USP43Q70EL4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.52□□□□□ -2.01
USP43Q70EL4 U8.21-201ENST00000459536 136 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC083906.5-201ENST00000503722 328 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RAC1P5-201ENST00000512182 576 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 Y_RNA.662-201ENST00000516028 97 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNU6-1012P-201ENST00000516606 109 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNA5SP82-201ENST00000516707 92 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 SNORA31.19-201ENST00000517079 126 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 RNA5SP290-201ENST00000517133 127 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC109479.2-201ENST00000517842 174 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC026241.1-201ENST00000517873 2142 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.52□□□□□ -2.01
USP43Q70EL4 AC093023.1-201ENST00000547375 507 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 UBL5P2-201ENST00000583788 219 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC104465.1-201ENST00000611365 139 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC004852.3-201ENST00000614131 326 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 AC240442.1-201ENST00000616055 283 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
USP43Q70EL4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USP43Q70EL4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
USP43Q70EL4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
USP43Q70EL4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP43Q70EL4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
USP43Q70EL4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.51□□□□□ -2.01
USP43Q70EL4 RNU6-1020P-201ENST00000363684 107 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 Y_RNA.358-201ENST00000365491 99 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 Y_RNA.441-201ENST00000384123 112 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 Y_RNA.504-201ENST00000384481 104 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 RNU6-1168P-201ENST00000390831 104 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 RNU6-700P-201ENST00000391043 107 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 SNORA53-201ENST00000391141 249 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.51□□□□□ -2.01
USP43Q70EL4 RNA5SP367-201ENST00000516557 118 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 RNU6-612P-201ENST00000516909 102 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 SNORA31.18-201ENST00000517043 134 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 CASP1P1-201ENST00000526345 212 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.51□□□□□ -2.01
USP43Q70EL4 TRAV28-201ENST00000557548 323 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AC023824.2-201ENST00000566185 400 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.51□□□□□ -2.01
USP43Q70EL4 AC008121.1-201ENST00000603244 268 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AL078605.1-201ENST00000603529 500 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AC136601.2-201ENST00000604356 474 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 AL137847.3-201ENST00000611521 109 ntBASIC2.51□□□□□ -2.01
USP43Q70EL4 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 144.9 ms