Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AC027419.1-201ENST00000522976 328 ntBASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AC091304.9-201ENST00000612091 226 ntBASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 AL031667.3-201ENST00000620124 655 ntBASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 MIR4320-201ENST00000636981 65 ntBASIC-0.22□□□□□ -2.45
CSPG4Q6UVK1 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 RNU6-952P-201ENST00000391164 108 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 SNORA40.8-201ENST00000411034 126 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 BX119904.4-201ENST00000424402 301 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 MTCYBP10-201ENST00000424905 650 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 AL606517.2-201ENST00000442855 241 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 SNORA31.3-201ENST00000516029 96 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 AL162424.1-201ENST00000602325 221 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 AL451064.1-201ENST00000607718 471 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 MIR8064-201ENST00000612863 90 ntBASIC-0.23□□□□□ -2.45
CSPG4Q6UVK1 RNU6-216P-201ENST00000363282 104 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 SNORA2B-201ENST00000384583 137 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RAP1BP3-201ENST00000407180 549 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MIR1827-201ENST00000408549 66 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC245047.3-201ENST00000429428 127 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTND1P9-201ENST00000453775 944 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 TPRKBP2-201ENST00000565969 475 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTCYBP33-201ENST00000575007 1130 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AL022154.1-201ENST00000604698 785 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC064807.4-201ENST00000607201 407 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC106754.2-201ENST00000623006 233 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC093875.1-201ENST00000623688 504 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RNU6-142P-201ENST00000384019 107 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RNU6-10P-201ENST00000384036 107 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RNU6-15P-201ENST00000384534 107 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MIR660-201ENST00000385235 97 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 SNORA75.6-201ENST00000391318 127 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 SNORD111-201ENST00000408139 94 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MIR1305-201ENST00000408300 86 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 BTF3L4P1-201ENST00000413813 468 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTCO2P1-201ENST00000424648 477 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 BTF3P11-201ENST00000426582 477 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AL162725.1-201ENST00000435405 301 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTND4P25-201ENST00000441039 533 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTCO1P19-201ENST00000443487 500 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 ZNF886P-201ENST00000450781 723 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RN7SKP12-201ENST00000516275 143 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 MTCO3P15-201ENST00000526563 574 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC021231.3-201ENST00000558497 370 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 UBE2Q2P8-201ENST00000560644 102 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC004584.2-201ENST00000570407 410 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC022217.4-201ENST00000604389 163 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AC104073.3-201ENST00000610942 955 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 AL359075.3-201ENST00000613288 217 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 TUG1_2.1-201ENST00000614234 87 ntBASIC-0.24□□□□□ -2.45
CSPG4Q6UVK1 RNU6-28P-201ENST00000362378 107 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 SNORD113.3-201ENST00000364630 78 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU6-534P-201ENST00000364877 106 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 SNORD116-23-201ENST00000384645 92 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 MIR145-201ENST00000384967 88 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU4-27P-201ENST00000410889 139 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU4-22P-201ENST00000411058 166 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC016909.1-201ENST00000415916 166 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC010154.1-201ENST00000425857 269 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL035398.1-201ENST00000430869 322 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC007547.1-201ENST00000462177 490 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 MTCO3P9-201ENST00000506989 781 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 MIR4666A-201ENST00000580160 79 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC012507.3-201ENST00000603556 477 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL355816.2-201ENST00000610049 647 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 PCGEM1.1-201ENST00000613431 131 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL513423.1-201ENST00000621695 132 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU4-56P-201ENST00000364700 142 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU6-487P-201ENST00000365430 104 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 RNU6-177P-201ENST00000411257 104 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AC019178.2-201ENST00000423595 505 ntBASIC-0.25□□□□□ -2.45
CSPG4Q6UVK1 AL353777.1-201ENST00000425552 326 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms