Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 uc_338.14-201ENST00000613162 166 ntBASIC5.95□□□□□ -1.46
SAMD1Q6SPF0 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
SAMD1Q6SPF0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.95□□□□□ -1.46
SAMD1Q6SPF0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 RNA5SP189-201ENST00000364920 115 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 MIR589-201ENST00000385238 99 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 SNORD77B-201ENST00000391112 67 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 RNU11-5P-201ENST00000391216 129 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 RNU6-86P-201ENST00000606534 107 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 MIR6079-201ENST00000635807 62 ntBASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SAMD1Q6SPF0 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 MIR23A-201ENST00000385245 73 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 RN7SL443P-201ENST00000464331 290 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 AC091153.1-201ENST00000466297 402 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 AP002884.2-201ENST00000471647 395 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 RN7SL319P-201ENST00000480656 221 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 AC090255.1-201ENST00000495779 349 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 RNU7-99P-201ENST00000516271 62 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 AC008033.2-201ENST00000542626 177 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 U2.20-201ENST00000613956 192 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SAMD1Q6SPF0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 USP8P1-201ENST00000494673 3183 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RNU6-1084P-201ENST00000362498 107 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RNU6-1313P-201ENST00000362622 102 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 SNORD68-201ENST00000363214 84 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RN7SKP153-201ENST00000365026 316 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AL627390.1-201ENST00000396055 340 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 CRYBB2P1-203ENST00000415709 538 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 HMGN2P31-201ENST00000432430 273 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AC087499.4-201ENST00000448505 178 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AC125388.1-201ENST00000459631 156 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RN7SL481P-201ENST00000477764 299 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AC093259.1-201ENST00000509755 300 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RNU6-341P-201ENST00000516973 96 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AC021613.1-201ENST00000623880 111 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 AC010733.2-201ENST00000589496 5702 ntBASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SAMD1Q6SPF0 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 Z98742.3-201ENST00000418637 326 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 AL645608.4-201ENST00000423619 154 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 BX323845.1-201ENST00000432417 179 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 HMGN2P18-201ENST00000450680 270 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 RNU7-23P-201ENST00000459465 62 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 VWA8P1-201ENST00000510889 176 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 AC093729.1-201ENST00000513074 128 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 AC108729.3-201ENST00000513484 108 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 AL160290.3-201ENST00000604869 165 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 MIR6133-201ENST00000617057 108 ntBASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SAMD1Q6SPF0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 AL139247.1-201ENST00000422768 325 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 AC244505.4-201ENST00000434905 287 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 SNRPGP14-201ENST00000435400 219 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 RPS12P2-201ENST00000439728 269 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 SSXP5-201ENST00000443473 287 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 RNU7-113P-201ENST00000459273 62 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 RN7SL385P-201ENST00000468873 276 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 SNORA4.4-201ENST00000515921 135 ntBASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC5.9□□□□□ -1.46
SAMD1Q6SPF0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SAMD1Q6SPF0 AP000542.2-201ENST00000623199 6179 ntBASIC5.9□□□□□ -1.47
SAMD1Q6SPF0 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms