Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 SNORA3C-201ENST00000408792 125 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 HMGN2P31-201ENST00000432430 273 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 RPL21P10-201ENST00000463521 490 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 RNU6-781P-201ENST00000516377 101 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 RNU6-126P-201ENST00000516685 103 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 SNORA31.21-201ENST00000517180 77 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 AC107934.2-201ENST00000518653 310 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 AC027419.1-201ENST00000522976 328 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 AC091042.1-201ENST00000579213 173 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 AL929325.1-201ENST00000603096 117 ntBASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDPF1Q6NVV7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 Y_RNA.91-201ENST00000363042 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 Y_RNA.203-201ENST00000364106 102 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNVU1-6-201ENST00000364688 164 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU1-63P-201ENST00000383902 164 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6-32P-201ENST00000383948 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6-13P-201ENST00000384248 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 Y_RNA.495-201ENST00000384435 112 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6-12P-201ENST00000384604 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6-41P-201ENST00000384741 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 HMGN2P8-201ENST00000391458 268 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 Z98745.1-201ENST00000402553 494 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 U6atac.2-201ENST00000408644 118 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 NDUFB1P1-201ENST00000435191 180 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RN7SL585P-201ENST00000470538 280 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RN7SL319P-201ENST00000480656 221 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 MIR449C-201ENST00000516047 92 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 RNU6-948P-201ENST00000516374 107 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 AC025647.1-201ENST00000517879 253 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 AC109329.2-201ENST00000519658 482 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 MIR5582-201ENST00000579697 68 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 AC091905.2-201ENST00000623143 306 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 MIR7641-1-201ENST00000627518 61 ntBASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDPF1Q6NVV7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AP001486.2-201ENST00000561652 5113 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 SNORD31B-201ENST00000364977 69 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RNU6-234P-201ENST00000365229 104 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 MIR141-201ENST00000384975 95 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 MIR591-201ENST00000385290 95 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 SDHCP2-201ENST00000398565 501 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 MIR298-201ENST00000401212 88 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RPS16P5-201ENST00000406501 404 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC063976.3-201ENST00000426849 329 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 Z98742.2-201ENST00000431564 187 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC016717.1-201ENST00000448918 286 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC245102.2-201ENST00000448956 180 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 Y_RNA.649-201ENST00000459077 103 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RN7SL330P-201ENST00000469709 307 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RPL23AP91-201ENST00000569211 455 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 MIR4474-201ENST00000579189 78 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 SNORA74C-1-201ENST00000580726 201 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC105245.1-201ENST00000581934 244 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AL020997.2-201ENST00000602607 184 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AL391358.1-201ENST00000605342 190 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 AC025166.1-201ENST00000612411 163 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 MIR6780A-201ENST00000615089 68 ntBASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.31□□□□□ -1.88
CDPF1Q6NVV7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 Y_RNA.111-201ENST00000363248 100 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 SNORA56-201ENST00000383966 129 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 MIR548A1-201ENST00000385041 97 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 MIR624-201ENST00000385217 97 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 AC008134.1-201ENST00000420943 193 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 MTCO1P44-201ENST00000441935 243 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 AL031737.1-201ENST00000450125 223 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 SNORD11-201ENST00000459124 84 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 RN7SL93P-201ENST00000463035 293 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 RPS29P24-201ENST00000486345 171 ntBASIC3.3□□□□□ -1.88
CDPF1Q6NVV7 ATP5EP1-201ENST00000510257 156 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms