Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC022447.4-201ENST00000504053 364 ntBASIC2.09□□□□□ -2.07
PDLIM3Q53GG5 CYP4A27P-201ENST00000567218 190 ntBASIC2.09□□□□□ -2.07
PDLIM3Q53GG5 MIR3126-201ENST00000577443 74 ntBASIC2.09□□□□□ -2.07
PDLIM3Q53GG5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.09□□□□□ -2.07
PDLIM3Q53GG5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.09□□□□□ -2.07
PDLIM3Q53GG5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.08
PDLIM3Q53GG5 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
PDLIM3Q53GG5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.122-201ENST00000363331 96 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 RNU6-1188P-201ENST00000363795 107 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 MIR29B2-201ENST00000385055 81 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 MIR27B-201ENST00000385129 97 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 SNORA4.4-201ENST00000515921 135 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 MIR5690-201ENST00000583739 73 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AC010928.2-201ENST00000588017 287 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 LARP7P1-201ENST00000605576 316 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PDLIM3Q53GG5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 RNA5SP289-201ENST00000362332 137 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 RNU5B-2P-201ENST00000363036 113 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 RNU1-112P-201ENST00000364401 164 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 MIR518E-201ENST00000385252 88 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AC009963.1-201ENST00000417265 157 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AL358453.1-201ENST00000422522 250 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 EIF4EP2-201ENST00000422816 654 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 USMG5P1-201ENST00000425964 177 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.653-201ENST00000459091 95 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 RPL23AP42-201ENST00000471152 471 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AC107032.1-201ENST00000485945 480 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 SNORA31.11-201ENST00000516528 139 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 RNU6-567P-201ENST00000516746 107 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 AC090517.1-201ENST00000569307 266 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 7SK.7-201ENST00000603504 247 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 PCGEM1.1-201ENST00000613431 131 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
PDLIM3Q53GG5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 ZNF299P-201ENST00000406845 1804 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AL596028.1-201ENST00000326971 197 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 U3.9-201ENST00000363823 204 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 RNA5SP456-201ENST00000364002 114 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.405-201ENST00000383979 100 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.451-201ENST00000384200 100 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 SNORD116-29-201ENST00000384516 83 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.524-201ENST00000384564 100 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 Y_RNA.561-201ENST00000384694 100 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 SNORA26.3-201ENST00000391119 136 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC027124.2-201ENST00000428249 105 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 CR769767.1-201ENST00000436337 346 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC009238.1-201ENST00000442165 424 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC009237.6-201ENST00000446969 424 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 MIR2053-201ENST00000459295 91 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 RNU7-87P-201ENST00000459343 62 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 RPL30P10-201ENST00000488148 337 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC007229.1-201ENST00000590455 412 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC005014.2-201ENST00000607795 599 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 AC022202.1-201ENST00000613515 211 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 MTND4P29-201ENST00000503122 1372 ntBASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
PDLIM3Q53GG5 WWP1P1-201ENST00000466609 2769 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 MIR337-201ENST00000362281 93 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 RNY1P16-201ENST00000363063 111 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 SNORD115-3-201ENST00000363100 82 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 RNU4-9P-201ENST00000364951 139 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 RNU6-890P-201ENST00000384121 107 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 RNU6-541P-201ENST00000384709 110 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 MIR499A-201ENST00000384903 122 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 MIR561-201ENST00000385216 97 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 MT-TD-201ENST00000387419 68 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 MIR1294-201ENST00000408503 142 ntBASIC2.05□□□□□ -2.08
PDLIM3Q53GG5 RNU2-41P-201ENST00000410991 178 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms